Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC104383.1-201ENST00000530297 370 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC128657.1-201ENST00000549459 145 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AL352979.3-201ENST00000553515 247 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 HMGB1P6-201ENST00000569046 646 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC090616.5-202ENST00000582111 297 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AL162413.1-201ENST00000603198 110 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 Z84480.1-201ENST00000605131 311 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC245389.1-201ENST00000605141 529 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC055839.1-201ENST00000634467 498 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 AC099654.14-201ENST00000638599 341 ntBASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PCDHB1Q9Y5F3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHB1Q9Y5F3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.34□□□□□ -1.72
PCDHB1Q9Y5F3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
PCDHB1Q9Y5F3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 DDX10P1-201ENST00000448545 1933 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 SPRR2C-201ENST00000290702 219 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 OR5P1P-201ENST00000299512 925 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-877P-201ENST00000383868 107 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AL109755.1-201ENST00000401791 649 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AL022722.2-201ENST00000402519 180 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 FGF7P8-201ENST00000402994 292 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AL583834.1-201ENST00000406943 343 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 RNU4-65P-201ENST00000410473 140 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 RNA5SP146-201ENST00000410743 123 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 RPS7P15-201ENST00000415804 584 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 MRPL50P2-201ENST00000416821 482 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AL353193.1-201ENST00000421444 268 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 RBMY1KP-201ENST00000423480 476 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 EIF1P3-201ENST00000423841 334 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC074344.1-201ENST00000512823 224 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-507P-201ENST00000516045 100 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-1281P-201ENST00000516223 105 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 MTND1P35-201ENST00000526739 508 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 PHBP17-201ENST00000528576 541 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC018630.1-201ENST00000541376 925 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 OR8R1P-201ENST00000543943 764 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 OR4K8P-201ENST00000578842 1048 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC006130.2-201ENST00000586202 326 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC012669.1-201ENST00000603209 283 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC103710.2-201ENST00000609912 942 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 FRG1KP-201ENST00000623592 341 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 AC034229.5-201ENST00000624258 185 ntBASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PCDHB1Q9Y5F3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 HSPE1P11-201ENST00000339579 310 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC067945.1-201ENST00000342609 618 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 MIR383-201ENST00000362257 73 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 Y_RNA.89-201ENST00000363031 102 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-1090P-201ENST00000364065 94 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 RNU1-132P-201ENST00000364300 164 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 Y_RNA.295-201ENST00000364918 102 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 SNORA11F-201ENST00000408237 128 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 RPL7P54-201ENST00000438336 674 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC016696.1-201ENST00000446949 318 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 ABCF2P2-201ENST00000450549 296 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC114797.1-201ENST00000514003 728 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 SCARNA24.1-201ENST00000516465 137 ntBASIC4.32□□□□□ -1.72
PCDHB1Q9Y5F3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms