Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 RNU6-188P-201ENST00000364207 107 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 RPL21P24-201ENST00000413752 448 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 RPL21P111-201ENST00000418453 477 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC018630.2-202ENST00000422992 927 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AL162389.1-201ENST00000449233 177 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC079168.2-201ENST00000453977 416 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC126389.1-201ENST00000477436 290 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 NIPA2P2-201ENST00000496376 1083 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 MTCO2P30-201ENST00000503662 364 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 SCARNA22-201ENST00000503991 125 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC026801.2-201ENST00000515352 425 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 HMGN1P28-201ENST00000521340 364 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 OR5BN1P-201ENST00000532955 829 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 HMGB3P26-201ENST00000560051 582 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC004696.1-201ENST00000614345 607 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC233309.1-201ENST00000619522 751 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC104985.2-201ENST00000620598 500 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AL353748.2-201ENST00000622148 471 ntBASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
R3HCC1Q9Y3T6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
R3HCC1Q9Y3T6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AL590240.1-201ENST00000334118 313 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RNU1-15P-201ENST00000353977 144 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 Y_RNA.255-201ENST00000364581 97 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RNU6-996P-201ENST00000365438 107 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RNU6-641P-201ENST00000384006 107 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RNU6-629P-201ENST00000384061 103 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 MIR124-3-201ENST00000384866 87 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 MIR454-201ENST00000390180 115 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RPS16P5-201ENST00000406501 404 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RPL23AP48-201ENST00000406913 488 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RNU2-39P-201ENST00000410604 198 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RSU1P3-201ENST00000412878 835 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RAC1P3-201ENST00000416129 580 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 MTCYBP8-201ENST00000422855 651 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 ZNF863P-201ENST00000426746 417 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC093106.2-201ENST00000428212 385 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 GAPDHP27-201ENST00000447427 1020 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RPS20P20-201ENST00000460498 340 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC007537.2-201ENST00000472093 511 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RPL39P36-201ENST00000490784 156 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 RNU6-875P-201ENST00000516488 106 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 CENPUP1-201ENST00000526649 1202 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 OR5B19P-201ENST00000531766 928 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 Y_RNA.804-201ENST00000615262 101 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 AC063943.3-201ENST00000615562 356 ntBASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
R3HCC1Q9Y3T6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.07□□□□□ -1.6
R3HCC1Q9Y3T6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms