Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 MIR454-201ENST00000390180 115 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 RNU6-510P-201ENST00000391239 108 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 RNU6-1148P-201ENST00000410992 104 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC009237.10-201ENST00000414112 510 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AL591623.2-201ENST00000449978 222 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 RPS29P15-201ENST00000458329 171 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 RNU7-59P-201ENST00000459101 61 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC112206.3-201ENST00000514578 389 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC105417.1-201ENST00000514691 285 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 RNU4-29P-201ENST00000515943 174 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 RNA5SP446-201ENST00000515955 82 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 RNA5SP73-201ENST00000516744 108 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 SUMO2P20-201ENST00000520803 283 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC103843.2-201ENST00000530523 682 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC005668.1-201ENST00000571142 476 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC006329.2-201ENST00000611491 394 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC130324.3-201ENST00000614165 542 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC079684.1-201ENST00000621405 437 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 AC090971.4-201ENST00000560291 1800 ntBASIC5.68□□□□□ -1.5
SPG7Q9UQ90 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.68□□□□□ -1.5
SPG7Q9UQ90 MTND4P35-201ENST00000604257 1375 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AC067945.1-201ENST00000342609 618 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 SNORA62.1-201ENST00000364287 154 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 SNORA51.2-201ENST00000364595 132 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 RNU6-641P-201ENST00000384006 107 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 RNU6-339P-201ENST00000384310 107 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 SNORD51-201ENST00000384320 80 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 MIR921-201ENST00000401133 56 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 MED13P1-201ENST00000428342 171 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 MTATP6P16-201ENST00000434543 526 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 MTND3P16-201ENST00000452205 344 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 MTND1P9-201ENST00000453775 944 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 HMGN2P26-201ENST00000463169 339 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 RNU7-51P-201ENST00000516560 62 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 RN7SKP82-201ENST00000516786 223 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 RNU6-1314P-201ENST00000517139 104 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 HMGB1P41-201ENST00000520234 440 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 MIR4512-201ENST00000583257 77 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AC245389.1-201ENST00000605141 529 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 AL359893.1-201ENST00000447628 1580 ntBASIC5.67□□□□□ -1.5
SPG7Q9UQ90 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SPG7Q9UQ90 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SPG7Q9UQ90 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.66□□□□□ -1.5
SPG7Q9UQ90 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SPG7Q9UQ90 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPG7Q9UQ90 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
SPG7Q9UQ90 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SPG7Q9UQ90 HSPE1P11-201ENST00000339579 310 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 Y_RNA.67-201ENST00000362870 100 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 SNORA63-201ENST00000363450 132 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 RNU6-1078P-201ENST00000364522 103 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 RNA5SP513-201ENST00000364648 118 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 AL359837.1-201ENST00000381357 287 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 MIR1302-11-201ENST00000408051 138 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 MIR1302-9-201ENST00000408365 138 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 MIR1302-10-201ENST00000408734 138 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.66□□□□□ -1.5
SPG7Q9UQ90 MTND3P8-201ENST00000412909 339 ntBASIC5.66□□□□□ -1.5
SPG7Q9UQ90 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.66□□□□□ -1.5
SPG7Q9UQ90 CYCSP10-201ENST00000417973 294 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms