Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 ZYG11AP1-201ENST00000430329 837 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 XKRYP2-201ENST00000432915 492 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 ELOCP26-201ENST00000436067 329 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AL513124.1-201ENST00000450410 614 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 HMGB1P22-201ENST00000505315 124 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 HIGD1AP13-201ENST00000509878 289 ntBASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM4Q9ULL8 ASNSP3-201ENST00000451989 1306 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 HSPA8P1-201ENST00000425843 1833 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 MIR3074-201ENST00000384885 81 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 RNU6-757P-201ENST00000410334 100 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 AL008987.1-201ENST00000415528 237 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 RPS25P9-201ENST00000435591 252 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 HMGB3P11-201ENST00000440127 604 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 ANKRD26P4-201ENST00000455755 950 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 SETP7-201ENST00000552169 453 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 AC087481.2-201ENST00000565492 330 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 MIR3690-201ENST00000580266 75 ntBASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM4Q9ULL8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 DHFRP6-201ENST00000401776 268 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 TOMM22P1-201ENST00000418578 312 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AL953862.1-201ENST00000423016 168 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 SDCBPP1-201ENST00000440192 890 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AL591719.1-201ENST00000444669 744 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 USP9YP10-201ENST00000454868 628 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 RNU7-136P-201ENST00000458819 69 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 RPL21P104-201ENST00000464143 478 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AC023424.2-201ENST00000493479 777 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AC083906.5-201ENST00000503722 328 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 USP9YP5-201ENST00000511770 630 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 RNU6-1095P-201ENST00000516148 108 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 DUXAP1-201ENST00000556632 463 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AC090615.1-201ENST00000577519 154 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AL031176.1-201ENST00000604554 466 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 AC099506.2-201ENST00000623074 221 ntBASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM4Q9ULL8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 RPL23AP29-201ENST00000397284 453 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 RNU2-47P-201ENST00000410649 186 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 AC108734.1-201ENST00000439549 399 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 RPL7P52-201ENST00000449200 742 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 AC108938.1-201ENST00000451204 136 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 AL024509.2-201ENST00000493462 493 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 AC012669.1-201ENST00000603209 283 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 AC112220.3-201ENST00000605502 502 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 TUSC7.1-201ENST00000610969 165 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 OR4G11P-202ENST00000642116 1414 ntBASIC5.85□□□□□ -1.47
SHROOM4Q9ULL8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 RNU6-952P-201ENST00000391164 108 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 FDX1P2-201ENST00000450769 375 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AL121877.1-201ENST00000453704 622 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 RPL9P32-201ENST00000464118 620 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 MLLT10P2-201ENST00000506434 249 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AC021146.8-201ENST00000507455 733 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 CR383656.7-201ENST00000548164 174 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 RNU6-88P-201ENST00000606801 100 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AL356585.4-201ENST00000623078 1229 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 AC079228.1-201ENST00000624774 1049 ntBASIC5.84□□□□□ -1.47
SHROOM4Q9ULL8 DDX43P2-201ENST00000604753 1354 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms