Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 RNU2-29P-201ENST00000410423 189 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AC104333.2-201ENST00000422630 192 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 TIMM9P1-201ENST00000436122 256 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 RPL12P46-201ENST00000436610 195 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 RPL35AP21-201ENST00000437667 333 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AF228730.2-201ENST00000438784 848 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 RNU7-180P-201ENST00000459240 63 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AC073073.1-201ENST00000493920 463 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 TRBVA-201ENST00000498804 316 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 MRPS35P2-201ENST00000508242 191 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AC091868.1-201ENST00000508746 304 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 RNA5SP464-201ENST00000516251 108 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 RNU6-1038P-201ENST00000516516 104 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 RN7SL802P-201ENST00000577858 299 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 MIR4775-201ENST00000581168 75 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AF038458.1-201ENST00000588406 262 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AC134882.1-201ENST00000603738 1676 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 AC009229.4-201ENST00000623854 1947 ntBASIC4.8□□□□□ -1.64
MBD1Q9UIS9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC107081.3-201ENST00000612715 2034 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 RNU6-1115P-201ENST00000362490 106 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 RNA5SP388-201ENST00000362584 119 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 Y_RNA.167-201ENST00000363735 109 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 RNY3P13-201ENST00000365542 102 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 RNU6-1207P-201ENST00000384343 107 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 SSXP10-201ENST00000402595 565 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 RNU6-954P-201ENST00000411355 107 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 BX323014.1-201ENST00000412876 237 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AL139396.1-201ENST00000421137 167 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC018865.2-201ENST00000423631 129 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 RPL12P34-201ENST00000424532 479 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 MTATP6P16-201ENST00000434543 526 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 CYCSP24-201ENST00000445119 316 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 HMGB1P15-201ENST00000453854 435 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC010618.1-201ENST00000469924 477 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC093840.1-201ENST00000511599 336 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AP005902.1-201ENST00000521358 186 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AP000857.1-201ENST00000532151 543 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 LSM6P2-201ENST00000552208 177 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 MIR3160-1-201ENST00000577972 85 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 MIR5699-201ENST00000578903 90 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC069061.3-201ENST00000582254 823 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AL159972.1-201ENST00000625150 448 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AL442639.1-201ENST00000625030 1899 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 TAB3P1-202ENST00000452645 1634 ntBASIC4.79□□□□□ -1.64
MBD1Q9UIS9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
MBD1Q9UIS9 AC015813.6-201ENST00000624409 5808 ntBASIC4.78□□□□□ -1.64
MBD1Q9UIS9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD1Q9UIS9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD1Q9UIS9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD1Q9UIS9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MBD1Q9UIS9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.78□□□□□ -1.64
MBD1Q9UIS9 OR56B2P-202ENST00000641377 2453 ntBASIC4.78□□□□□ -1.64
MBD1Q9UIS9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.78□□□□□ -1.64
MBD1Q9UIS9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MBD1Q9UIS9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD1Q9UIS9 SNORD113-7-201ENST00000363762 77 ntBASIC4.78□□□□□ -1.64
MBD1Q9UIS9 Y_RNA.378-201ENST00000365652 113 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms