Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CHD7Q9P2D1 RNU6-1032P-201ENST00000384100 107 ntBASIC1.65□□□□□ -2.14
CHD7Q9P2D1 CALM1P2-201ENST00000452941 448 ntBASIC1.65□□□□□ -2.14
CHD7Q9P2D1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.65□□□□□ -2.14
CHD7Q9P2D1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
CHD7Q9P2D1 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
CHD7Q9P2D1 AC007536.1-201ENST00000533382 349 ntBASIC1.65□□□□□ -2.14
CHD7Q9P2D1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.65□□□□□ -2.14
CHD7Q9P2D1 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.65□□□□□ -2.14
CHD7Q9P2D1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CHD7Q9P2D1 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 RPS27P5-201ENST00000444247 244 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 RPL34P26-201ENST00000445636 354 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AC008126.1-201ENST00000549019 480 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 MYL12BP1-201ENST00000569826 507 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AC080078.3-201ENST00000605407 463 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AC034102.8-201ENST00000615146 484 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 U73479.1-201ENST00000618062 168 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CHD7Q9P2D1 MTCO1P14-201ENST00000441695 1559 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AC005517.2-201ENST00000424673 553 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AL365400.1-201ENST00000431854 640 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AP001804.3-201ENST00000525146 880 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.65□□□□□ -2.15
CHD7Q9P2D1 AC092159.4-201ENST00000624944 550 ntBASIC1.65□□□□□ -2.15
CHD7Q9P2D1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 RNU1-22P-201ENST00000363334 158 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 RPL39P40-201ENST00000445481 146 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 RPL21P5-201ENST00000554662 472 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 TPT1P14-201ENST00000448018 505 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 AC008571.1-201ENST00000467232 300 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 MTATP6P3-201ENST00000581686 676 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 AC006023.2-201ENST00000609916 167 ntBASIC1.64□□□□□ -2.15
CHD7Q9P2D1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CHD7Q9P2D1 MTCO1P6-201ENST00000481192 1384 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 AC090453.1-201ENST00000495560 436 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 MTND5P21-201ENST00000531961 522 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 ABI1P1-201ENST00000603375 1120 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 AL157834.3-201ENST00000615543 103 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 SNORA26.7-201ENST00000391288 122 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 NCSTNP1-201ENST00000406229 144 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 AL136133.1-201ENST00000413694 376 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 HMGB1P45-201ENST00000435986 653 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 ATG10-AS1-201ENST00000504846 648 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 MTCO1P4-201ENST00000520516 1409 ntBASIC1.63□□□□□ -2.15
CHD7Q9P2D1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CHD7Q9P2D1 SNORA62.2-201ENST00000364672 152 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 DYNLT3P1-201ENST00000378574 347 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 RPS29P1-201ENST00000465274 159 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.62□□□□□ -2.15
CHD7Q9P2D1 MTND3P6-201ENST00000485242 339 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC079203.1-201ENST00000487972 404 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC093767.1-201ENST00000504523 156 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHD7Q9P2D1 MTCYBP7-201ENST00000419540 1134 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 ARF4P2-201ENST00000430209 526 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 KATNBL1P3-201ENST00000443475 909 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.62□□□□□ -2.15
CHD7Q9P2D1 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC022634.1-201ENST00000520765 532 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC007390.1-201ENST00000415722 356 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AL138785.1-201ENST00000425821 331 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.62□□□□□ -2.15
CHD7Q9P2D1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC090819.1-201ENST00000523800 1111 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.62□□□□□ -2.15
CHD7Q9P2D1 SNORA50A-202ENST00000629536 136 ntBASIC1.62□□□□□ -2.15
CHD7Q9P2D1 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.61□□□□□ -2.15
CHD7Q9P2D1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.61□□□□□ -2.15
CHD7Q9P2D1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms