Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN1Q9P244 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 SPRR2C-201ENST00000290702 219 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 RNU6-511P-201ENST00000363496 107 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN1Q9P244 RNU1-13P-201ENST00000384499 162 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AL359634.1-202ENST00000404721 284 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 RNA5SP317-201ENST00000410176 116 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 RNA5SP311-201ENST00000411290 116 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 HMGB3P23-201ENST00000414981 585 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC018630.2-202ENST00000422992 927 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC008850.1-201ENST00000427546 362 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 USP12PX-201ENST00000432383 1057 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 RPS27AP13-201ENST00000498403 237 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 SAP18P1-201ENST00000512058 390 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 RN7SKP298-201ENST00000515950 94 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 RNA5SP315-201ENST00000516340 116 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 RNA5SP312-201ENST00000517068 116 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 RNU6-840P-201ENST00000517275 65 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AP005205.1-201ENST00000563503 508 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC055876.1-202ENST00000567053 138 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 RPL23AP97-201ENST00000568955 471 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 MIR3913-1-201ENST00000577744 102 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 ZNF415P1-201ENST00000582279 1166 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 NDUFA8P1-201ENST00000605525 367 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC112484.5-201ENST00000624189 228 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 RNA5SP196-201ENST00000625967 102 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 AC110994.2-201ENST00000635481 492 ntBASIC3.92□□□□□ -1.78
LRFN1Q9P244 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN1Q9P244 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN1Q9P244 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LRFN1Q9P244 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.92□□□□□ -1.78
LRFN1Q9P244 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 RNU1-20P-201ENST00000363314 162 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 RNA5SP513-201ENST00000364648 118 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 RNU1-39P-201ENST00000383897 165 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 Y_RNA.505-201ENST00000384489 102 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 MIR514A1-201ENST00000385133 98 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 MIR1911-201ENST00000410783 80 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AL031779.1-201ENST00000415663 330 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC108032.1-201ENST00000416706 207 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 MTND3P17-201ENST00000416968 344 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 YPEL5P1-201ENST00000419731 367 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC137499.1-201ENST00000427602 88 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC104850.1-201ENST00000435940 476 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 GAPDHP27-201ENST00000447427 1020 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 HMGN2P7-201ENST00000456186 273 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 RPS27AP1-201ENST00000475545 471 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC106872.2-201ENST00000494303 480 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 GMPSP1-201ENST00000514075 579 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC023632.4-201ENST00000517783 191 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 MTCO2P4-201ENST00000517968 247 ntBASIC3.91□□□□□ -1.78
LRFN1Q9P244 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.91□□□□□ -1.78
LRFN1Q9P244 FAM60DP-201ENST00000524174 632 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms