Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 RPS12P23-201ENST00000419579 400 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AL139095.3-201ENST00000419672 1203 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 RPL30P3-201ENST00000424262 333 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 DNAJC19P7-201ENST00000428811 344 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC068287.1-201ENST00000430283 295 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 TIMM9P1-201ENST00000436122 256 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 FTH1P1-201ENST00000437933 532 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 MTND4LP16-201ENST00000440828 295 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 BNIP3P2-201ENST00000441221 577 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC083798.1-201ENST00000472671 131 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 RN7SL810P-201ENST00000493031 276 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AL592156.1-201ENST00000508758 304 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 RNU6-835P-201ENST00000516974 104 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 CENPUP1-201ENST00000526649 1202 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 OR5BC1P-201ENST00000529327 739 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC005255.1-201ENST00000593748 216 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC007566.2-201ENST00000603642 413 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AL590099.1-201ENST00000615276 138 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC103858.2-201ENST00000621471 543 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC010338.1-201ENST00000621823 717 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AP001486.2-201ENST00000561652 5113 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 AC009902.3-201ENST00000606235 2172 ntBASIC4.1□□□□□ -1.75
EHD3Q9NZN3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EHD3Q9NZN3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 Y_RNA.86-201ENST00000363020 111 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 RNU6-359P-201ENST00000365466 108 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 SNORA69-201ENST00000383895 132 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 MIR124-3-201ENST00000384866 87 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 OR9R1P-201ENST00000412200 877 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 GPR143P-201ENST00000434155 205 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 TPT1P13-201ENST00000449760 499 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 RPL37P6-202ENST00000464216 403 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 MTCO2P29-201ENST00000465212 189 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 RPL35AP15-201ENST00000468042 339 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 COX7A2P2-201ENST00000505291 250 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC005798.1-201ENST00000513715 387 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 LRRC34P2-201ENST00000514850 553 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 RNU6-27P-201ENST00000516146 107 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 SNORA70.14-201ENST00000516205 110 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 SCARNA24.1-201ENST00000516465 137 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC006064.5-201ENST00000541782 248 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC123904.3-201ENST00000547218 814 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 SETP2-201ENST00000553886 926 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC113403.1-201ENST00000604910 193 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC090948.1-201ENST00000607464 549 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AL031666.3-201ENST00000609320 1006 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC007546.1-201ENST00000619452 559 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC140479.6-201ENST00000633535 357 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EHD3Q9NZN3 ZNF680P1-201ENST00000436625 1469 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 AC092326.2-201ENST00000624772 1561 ntBASIC4.09□□□□□ -1.75
EHD3Q9NZN3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
EHD3Q9NZN3 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
EHD3Q9NZN3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
EHD3Q9NZN3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
EHD3Q9NZN3 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.76
EHD3Q9NZN3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
EHD3Q9NZN3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
EHD3Q9NZN3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
EHD3Q9NZN3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
EHD3Q9NZN3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
EHD3Q9NZN3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms