Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 NEK4P1-201ENST00000433383 879 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 RSU1P2-202ENST00000437884 485 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC091862.1-201ENST00000438016 1100 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AL590664.1-201ENST00000448065 339 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 ARPC3P2-201ENST00000457786 533 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 RPL30P14-201ENST00000482744 348 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 LINC00888-204ENST00000487386 421 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 SNORA31.22-201ENST00000517204 135 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AP004247.1-201ENST00000531556 1289 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC023538.1-201ENST00000534576 736 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 MIR4425-201ENST00000580572 84 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC097468.3-201ENST00000607956 456 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 RNVU1-4-201ENST00000612985 164 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC006133.1-201ENST00000617106 264 ntBASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BLOC1S4Q9NUP1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 RNU5E-8P-201ENST00000363502 116 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AP002088.1-201ENST00000382740 395 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-432P-201ENST00000384196 109 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 MIR490-201ENST00000384865 128 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL590084.2-201ENST00000401481 382 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 RPL23AP39-201ENST00000415533 405 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 BX842559.1-201ENST00000419615 532 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 USP9YP36-201ENST00000424581 829 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AC234781.2-201ENST00000426370 994 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 HMGN2P31-201ENST00000432430 273 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL117351.1-201ENST00000438864 766 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL606662.1-201ENST00000445763 553 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 HMGN2P13-201ENST00000476476 274 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AC021678.1-201ENST00000505195 936 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 MTATP6P15-201ENST00000527233 835 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL357094.1-201ENST00000603845 844 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 RMST_8.1-201ENST00000610287 165 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL138880.2-201ENST00000616214 239 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL031667.3-201ENST00000620124 655 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AC019226.1-201ENST00000625666 515 ntBASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BLOC1S4Q9NUP1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-433P-201ENST00000363216 104 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RNU5A-2P-201ENST00000384337 116 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 TAS2R15P-201ENST00000390674 928 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AL359704.1-201ENST00000411586 781 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 HMGN1P24-201ENST00000412282 298 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AMD1P2-201ENST00000412936 992 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RPS29P4-201ENST00000414733 161 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AL831737.1-201ENST00000441288 271 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 MTND2P24-201ENST00000453434 806 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 AL359385.1-201ENST00000456509 365 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 RPL30P5-201ENST00000494923 336 ntBASIC3.8□□□□□ -1.8
BLOC1S4Q9NUP1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms