Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RNU1-143P-201ENST00000516296 146 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC026407.1-201ENST00000518369 204 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 IGHV3-76-201ENST00000522465 295 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 SNRPGP16-201ENST00000533275 226 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 VN1R92P-201ENST00000598511 928 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 BBIP1P1-201ENST00000602999 279 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 U1.23-201ENST00000610293 146 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 RNU1-68P-201ENST00000615382 146 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 U1.39-201ENST00000621562 146 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 SNORA50A-202ENST00000629536 136 ntBASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SMC4Q9NTJ3 AF117829.1-206ENST00000621883 3802 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AL161781.1-201ENST00000354277 403 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 MIR208A-201ENST00000362287 71 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 RNA5SP267-201ENST00000364893 126 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 U3.19-201ENST00000390893 196 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AC119751.3-201ENST00000399720 670 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 RSL24D1P4-201ENST00000400938 484 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AC004866.2-201ENST00000438285 481 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AL121871.1-201ENST00000443413 436 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 SNORA31.8-201ENST00000516327 108 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AC239860.2-201ENST00000525886 270 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 FAM60BP-201ENST00000578364 658 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 TUG1_1.1-201ENST00000610654 145 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 uc_338.25-201ENST00000613756 156 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AL136981.2-201ENST00000617319 734 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 AC073476.4-201ENST00000628409 72 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 TAB3P1-202ENST00000452645 1634 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 MTND5P1-201ENST00000445440 1375 ntBASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SMC4Q9NTJ3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 Y_RNA.234-201ENST00000364409 97 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AP000567.1-201ENST00000406413 156 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 RNU4-65P-201ENST00000410473 140 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 PIGPP2-201ENST00000411569 458 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC083875.1-201ENST00000419509 405 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC005005.2-201ENST00000420779 380 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC010099.3-201ENST00000423896 409 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC079780.1-201ENST00000428259 207 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 EEF1E1P1-201ENST00000446998 430 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 RPL23AP31-201ENST00000456160 467 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC021146.5-201ENST00000503544 545 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC110794.1-201ENST00000505816 425 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 HMGB3P15-201ENST00000507326 574 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC074250.1-201ENST00000511117 192 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 SYF2P1-201ENST00000550658 413 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC090186.1-201ENST00000605991 572 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 RNU6-88P-201ENST00000606801 100 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC100793.4-201ENST00000613683 429 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC097520.1-201ENST00000624435 385 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC079228.1-201ENST00000624774 1049 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.11□□□□□ -1.75
SMC4Q9NTJ3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms