Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC068135.2-201ENST00000569293 1028 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC012119.1-201ENST00000603184 222 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AL645944.1-201ENST00000603857 493 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC087588.2-201ENST00000617667 426 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AL353770.2-201ENST00000620024 78 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 MTND4P23-201ENST00000447723 1363 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 POLHP1-201ENST00000411806 470 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC234781.4-201ENST00000419384 244 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC009965.2-201ENST00000425328 970 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AL138787.1-202ENST00000437804 898 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC245517.2-201ENST00000442890 346 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 RN7SL297P-201ENST00000483161 293 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 BOLA3P3-201ENST00000505182 232 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC010329.2-201ENST00000595195 2737 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AL021368.2-201ENST00000606125 5352 ntBASIC1.68□□□□□ -2.14
CHD8Q9HCK8 AC009487.4-201ENST00000624969 3585 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 Y_RNA.136-201ENST00000363444 102 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 RNU1-138P-201ENST00000384093 164 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 Y_RNA.518-201ENST00000384552 113 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.67□□□□□ -2.14
CHD8Q9HCK8 THAP5P1-201ENST00000439089 262 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 HMGB3P8-201ENST00000449709 577 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AC092185.1-201ENST00000491371 97 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AP001207.1-201ENST00000524051 481 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AC008121.3-201ENST00000618726 433 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AC098657.3-201ENST00000620434 263 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 HMGB1P5-201ENST00000255320 642 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.67□□□□□ -2.14
CHD8Q9HCK8 HMGB3P26-201ENST00000560051 582 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AL138955.1-201ENST00000622881 1040 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 FAM35CP-201ENST00000554755 2470 ntBASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.67□□□□□ -2.14
CHD8Q9HCK8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.67□□□□□ -2.14
CHD8Q9HCK8 U3.15-201ENST00000365398 212 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.66□□□□□ -2.14
CHD8Q9HCK8 CBWD4P-201ENST00000445695 655 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 AC079203.1-201ENST00000487972 404 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 AC068305.1-201ENST00000497406 726 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.66□□□□□ -2.14
CHD8Q9HCK8 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 MIR5000-201ENST00000577717 103 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 AL356575.1-201ENST00000603008 283 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CHD8Q9HCK8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CHD8Q9HCK8 AP001486.2-201ENST00000561652 5113 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CHD8Q9HCK8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
CHD8Q9HCK8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.66□□□□□ -2.14
CHD8Q9HCK8 MIR4421-201ENST00000578133 69 ntBASIC1.66□□□□□ -2.14
CHD8Q9HCK8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHD8Q9HCK8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.65□□□□□ -2.14
CHD8Q9HCK8 RNU1-22P-201ENST00000363334 158 ntBASIC1.65□□□□□ -2.14
CHD8Q9HCK8 SNORA68.2-201ENST00000391263 128 ntBASIC1.65□□□□□ -2.14
CHD8Q9HCK8 RNU6-174P-201ENST00000410406 106 ntBASIC1.65□□□□□ -2.14
CHD8Q9HCK8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.65□□□□□ -2.14
CHD8Q9HCK8 AMD1P1-201ENST00000457220 922 ntBASIC1.65□□□□□ -2.14
CHD8Q9HCK8 AP000852.1-201ENST00000472460 573 ntBASIC1.65□□□□□ -2.14
CHD8Q9HCK8 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.14
CHD8Q9HCK8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.65□□□□□ -2.14
CHD8Q9HCK8 AC097468.3-201ENST00000607956 456 ntBASIC1.65□□□□□ -2.14
CHD8Q9HCK8 MIR6788-201ENST00000618842 66 ntBASIC1.65□□□□□ -2.14
CHD8Q9HCK8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CHD8Q9HCK8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.65□□□□□ -2.15
CHD8Q9HCK8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.15
CHD8Q9HCK8 DEFA7P-201ENST00000382676 285 ntBASIC1.65□□□□□ -2.15
CHD8Q9HCK8 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.65□□□□□ -2.15
CHD8Q9HCK8 MTCO1P48-201ENST00000448024 1096 ntBASIC1.65□□□□□ -2.15
CHD8Q9HCK8 RPL30P6-201ENST00000475925 342 ntBASIC1.65□□□□□ -2.15
CHD8Q9HCK8 RPL9P33-201ENST00000484311 566 ntBASIC1.65□□□□□ -2.15
CHD8Q9HCK8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
CHD8Q9HCK8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
CHD8Q9HCK8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CHD8Q9HCK8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.65□□□□□ -2.15
CHD8Q9HCK8 RNU6-53P-201ENST00000365367 106 ntBASIC1.64□□□□□ -2.15
CHD8Q9HCK8 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.64□□□□□ -2.15
CHD8Q9HCK8 RPL36AP6-201ENST00000435770 321 ntBASIC1.64□□□□□ -2.15
CHD8Q9HCK8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.64□□□□□ -2.15
CHD8Q9HCK8 LRRC34P2-201ENST00000514850 553 ntBASIC1.64□□□□□ -2.15
CHD8Q9HCK8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.64□□□□□ -2.15
CHD8Q9HCK8 MTATP6P3-201ENST00000581686 676 ntBASIC1.64□□□□□ -2.15
CHD8Q9HCK8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CHD8Q9HCK8 MTND4P12-201ENST00000498999 1377 ntBASIC1.64□□□□□ -2.15
CHD8Q9HCK8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.64□□□□□ -2.15
CHD8Q9HCK8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.64□□□□□ -2.15
CHD8Q9HCK8 HAUS1P1-201ENST00000505275 832 ntBASIC1.64□□□□□ -2.15
CHD8Q9HCK8 EEF1B2P4-201ENST00000551398 348 ntBASIC1.64□□□□□ -2.15
CHD8Q9HCK8 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.64□□□□□ -2.15
CHD8Q9HCK8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms