Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 HMGN1P12-201ENST00000499125 195 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 MTCYBP17-201ENST00000503579 789 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 HMGN1P11-201ENST00000508668 303 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC007991.1-201ENST00000522680 631 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 OR4A12P-201ENST00000530847 918 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC123904.3-201ENST00000547218 814 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AL389895.1-201ENST00000554127 252 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 SULT1C2P1-202ENST00000562418 459 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 UBE2V2P2-201ENST00000587677 504 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC012468.1-201ENST00000604888 430 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC019176.2-201ENST00000611579 315 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AL136221.1-201ENST00000621449 509 ntBASIC3.99□□□□□ -1.77
EBF3Q9H4W6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
EBF3Q9H4W6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 OR4G11P-202ENST00000642116 1414 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 RNU1-18P-201ENST00000363062 164 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 RPS3AP36-201ENST00000398190 775 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 RPL31P52-201ENST00000407532 367 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 SYF2P2-201ENST00000417620 583 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AL035423.1-201ENST00000420331 213 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 SDCBPP2-201ENST00000424643 885 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 HMGN2P31-201ENST00000432430 273 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 RN7SL93P-201ENST00000463035 293 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AL133162.1-201ENST00000463228 453 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 RPS29P25-201ENST00000481709 171 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 NDUFB4P2-201ENST00000509515 391 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 MTND3P22-201ENST00000510932 243 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AF131216.2-201ENST00000512316 564 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC006499.2-201ENST00000513470 337 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 SNORD116-26-201ENST00000516006 96 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 MTCO2P4-201ENST00000517968 247 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 OR6C73P-201ENST00000546432 358 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC090502.2-201ENST00000549267 280 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 MIR4716-201ENST00000579628 84 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 OR6R2P-201ENST00000609216 300 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AL020991.1-201ENST00000612314 373 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AL592295.2-201ENST00000612578 206 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC084757.4-201ENST00000616350 526 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC104010.1-201ENST00000616889 150 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 AC231657.1-201ENST00000624313 397 ntBASIC3.98□□□□□ -1.77
EBF3Q9H4W6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.98□□□□□ -1.77
EBF3Q9H4W6 MTCO1P14-201ENST00000441695 1559 ntBASIC3.97□□□□□ -1.77
EBF3Q9H4W6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 Y_RNA.89-201ENST00000363031 102 ntBASIC3.97□□□□□ -1.77
EBF3Q9H4W6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 Y_RNA.402-201ENST00000383972 102 ntBASIC3.97□□□□□ -1.77
EBF3Q9H4W6 RNU2-28P-201ENST00000410457 189 ntBASIC3.97□□□□□ -1.77
EBF3Q9H4W6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 PRELID3BP11-201ENST00000414230 479 ntBASIC3.97□□□□□ -1.77
EBF3Q9H4W6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 ATP5HP2-201ENST00000433885 485 ntBASIC3.97□□□□□ -1.77
EBF3Q9H4W6 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.97□□□□□ -1.77
EBF3Q9H4W6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms