Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS11Q9H270 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
VPS11Q9H270 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS11Q9H270 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS11Q9H270 RNA5SP52-201ENST00000362448 134 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 RNA5SP123-201ENST00000363244 119 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
VPS11Q9H270 Y_RNA.395-201ENST00000383945 109 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 RNU6-837P-201ENST00000391056 108 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 RPL23AP48-201ENST00000406913 488 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS11Q9H270 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS11Q9H270 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS11Q9H270 MTATP6P18-201ENST00000417994 673 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS11Q9H270 RBMY2QP-201ENST00000429799 1147 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 EZH2P1-201ENST00000431167 291 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 RPEP2-201ENST00000432149 701 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 MRPS18BP2-201ENST00000434310 759 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 RPS15AP9-201ENST00000439856 381 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS11Q9H270 snoU109.4-201ENST00000458953 143 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 AC010469.1-201ENST00000463864 576 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 MRPS17P3-201ENST00000465453 385 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.59□□□□□ -1.67
VPS11Q9H270 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS11Q9H270 PCBP2P3-201ENST00000509726 843 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 AC006499.6-201ENST00000511169 607 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 RNU4-49P-201ENST00000516080 140 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 RNU6-27P-201ENST00000516146 107 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 RNA5SP34-201ENST00000516887 130 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS11Q9H270 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS11Q9H270 RN7SL652P-201ENST00000577769 300 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS11Q9H270 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS11Q9H270 BBIP1P1-201ENST00000602999 279 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 AC080078.3-201ENST00000605407 463 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 SDR42E1P1-201ENST00000611327 477 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS11Q9H270 AC091925.1-201ENST00000623204 462 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 AL133216.2-202ENST00000634512 349 ntBASIC4.59□□□□□ -1.67
VPS11Q9H270 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VPS11Q9H270 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VPS11Q9H270 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS11Q9H270 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VPS11Q9H270 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS11Q9H270 PNPT1P2-201ENST00000456768 2050 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 A2MP1-204ENST00000566278 4130 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VPS11Q9H270 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS11Q9H270 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS11Q9H270 RNU6-263P-201ENST00000363811 107 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS11Q9H270 SNORD51-201ENST00000384320 80 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 RNU1-44P-201ENST00000384453 163 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VPS11Q9H270 RNU6-308P-201ENST00000390957 107 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 AC114482.1-201ENST00000418010 247 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 AL645937.1-202ENST00000421799 937 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 RPL23AP25-201ENST00000430973 463 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS11Q9H270 SKP1P1-201ENST00000438081 489 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 MTND2P29-201ENST00000438595 412 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 CBX1P1-201ENST00000440184 427 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS11Q9H270 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 RNU6-329P-201ENST00000459618 107 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AC104563.1-201ENST00000476147 376 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 RPSAP50-201ENST00000481955 852 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 KLHL2P1-201ENST00000508691 521 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 OR51K1P-201ENST00000510214 950 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AC114797.1-201ENST00000514003 728 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.58□□□□□ -1.68
VPS11Q9H270 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 Y_RNA.718-201ENST00000517110 102 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 COPS8P3-201ENST00000526024 482 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS11Q9H270 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.58□□□□□ -1.68
VPS11Q9H270 AC024224.1-201ENST00000538284 609 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.58□□□□□ -1.68
VPS11Q9H270 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VPS11Q9H270 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 AC005668.1-201ENST00000571142 476 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS11Q9H270 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS11Q9H270 AL391358.1-201ENST00000605342 190 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS11Q9H270 AL365434.2-201ENST00000607979 234 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 BX323046.1-201ENST00000610145 535 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 AC091925.2-201ENST00000625059 256 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 MTND4LP32-201ENST00000636111 270 ntBASIC4.58□□□□□ -1.68
VPS11Q9H270 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS11Q9H270 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms