Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 RPS15AP17-201ENST00000470598 390 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC114981.1-201ENST00000503897 678 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 RNA5SP385-201ENST00000515947 110 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC107016.2-201ENST00000547968 190 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 CR383656.7-201ENST00000548164 174 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 MED28P6-201ENST00000558776 231 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 H3F3AP1-201ENST00000559984 334 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 LARP7P2-201ENST00000575306 125 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC083760.1-201ENST00000589621 670 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC069431.2-201ENST00000604149 1099 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC009570.1-201ENST00000609599 745 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC090115.4-201ENST00000609970 188 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AL162274.2-201ENST00000614406 332 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 AC084824.4-201ENST00000620106 731 ntBASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCSER1Q9C0I3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 TAB3P1-202ENST00000452645 1634 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 RNU6-525P-201ENST00000363685 104 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 SNORA51.4-201ENST00000364993 124 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 RNU6-851P-201ENST00000384565 107 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 UBA52P6-201ENST00000399822 382 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 MTATP6P27-201ENST00000416987 621 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 MRPS36P1-201ENST00000421291 307 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 BEND7P1-201ENST00000422058 457 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 MTATP6P4-201ENST00000427725 675 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 NANOGNBP1-201ENST00000448444 480 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 RNA5SP310-201ENST00000459084 116 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 snoU109.3-201ENST00000459477 145 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 RPS26P21-201ENST00000475397 348 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 VN1R104P-201ENST00000505115 1009 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 SNORA31.1-201ENST00000515993 133 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 SNORA31.5-201ENST00000516190 133 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC091057.3-201ENST00000602684 733 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AL022099.1-201ENST00000604551 712 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AL121652.1-201ENST00000608851 448 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC135507.2-201ENST00000612443 309 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC016597.2-201ENST00000613256 341 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC010338.1-201ENST00000621823 717 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC004009.2-201ENST00000623016 728 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC010608.3-201ENST00000625048 527 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
CCSER1Q9C0I3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 SNORA44-201ENST00000384584 132 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 RPL17P50-201ENST00000396131 546 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 MTND2P9-201ENST00000422293 931 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 USP9YP36-201ENST00000424581 829 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 MTND4P6-201ENST00000438297 472 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AL645638.1-201ENST00000440519 361 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 OR6K5P-201ENST00000447050 945 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AC108734.3-201ENST00000481241 1165 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 RNU6-276P-201ENST00000516114 96 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 FAM60DP-201ENST00000524174 632 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AC011471.1-201ENST00000585766 187 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AC004987.4-201ENST00000603383 338 ntBASIC3.25□□□□□ -1.89
CCSER1Q9C0I3 AC106900.2-201ENST00000604994 317 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms