Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 Y_RNA.61-201ENST00000362835 102 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-451P-201ENST00000362921 107 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RNU6-1078P-201ENST00000364522 103 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 Y_RNA.279-201ENST00000364763 95 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RNU2-47P-201ENST00000410649 186 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RNA5SP306-201ENST00000411087 107 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 OR9R1P-201ENST00000412200 877 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RPS20P14-201ENST00000412545 360 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 ELOCP23-201ENST00000452014 332 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RNU7-59P-201ENST00000459101 61 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RPS27AP17-201ENST00000463344 455 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RN7SL604P-201ENST00000492589 296 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC025554.1-201ENST00000505641 188 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 MTCO1P35-201ENST00000515270 228 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RN7SKP234-201ENST00000517173 224 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC011979.2-201ENST00000527568 352 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC105224.1-201ENST00000587055 421 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 MIR92B-201ENST00000607575 96 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC004908.2-201ENST00000609090 574 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC023043.4-201ENST00000612081 449 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 DISC2.1-201ENST00000612827 205 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AL354950.2-201ENST00000617939 290 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 MIR4727-201ENST00000622232 55 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC024940.5-201ENST00000622889 474 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC019278.1-201ENST00000623516 479 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC093648.1-201ENST00000623546 606 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC034229.5-201ENST00000624258 185 ntBASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
AMBRA1Q9C0C7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 Y_RNA.86-201ENST00000363020 111 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 RNU5E-8P-201ENST00000363502 116 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 U3.11-201ENST00000364476 212 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 SNRPFP1-201ENST00000414761 252 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 MTCO3P12-201ENST00000416718 547 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 RPS27AP12-201ENST00000429552 465 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 RPS20P5-201ENST00000434808 360 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 ARL2BPP10-201ENST00000446487 531 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 TPT1P14-201ENST00000448018 505 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AL162591.2-201ENST00000449634 317 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC068305.1-201ENST00000497406 726 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC114797.1-201ENST00000514003 728 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AP000857.1-201ENST00000532151 543 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AL161713.1-201ENST00000555538 145 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 GLUD1P4-201ENST00000590914 418 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AL117336.2-201ENST00000602435 335 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC103710.2-201ENST00000609912 942 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 RMST_3.1-201ENST00000611651 109 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC233309.1-201ENST00000619522 751 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AC006504.8-201ENST00000621046 635 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 AL161637.1-201ENST00000622380 412 ntBASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
AMBRA1Q9C0C7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms