Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AC093303.1-201ENST00000514549 295 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AC021006.3-201ENST00000530771 192 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AC109635.4-202ENST00000531666 412 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 SNRPGP18-201ENST00000553000 214 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 EDDM3DP-201ENST00000554692 434 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AL132822.1-201ENST00000617063 513 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 uc_338.34-201ENST00000617467 174 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 uc_338.22-201ENST00000622722 187 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AP000843.1-201ENST00000624880 701 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AC121333.1-201ENST00000567488 2709 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 AC092435.4-201ENST00000623012 4159 ntBASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
FOXP3Q9BZS1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
FOXP3Q9BZS1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
FOXP3Q9BZS1 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
FOXP3Q9BZS1 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
FOXP3Q9BZS1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC007823.1-201ENST00000569932 1566 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 MTND4P14-201ENST00000435799 1354 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 Y_RNA.31-201ENST00000362574 102 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 MIR141-201ENST00000384975 95 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 RNU2-15P-201ENST00000410692 191 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC074085.1-201ENST00000413598 418 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC009237.10-201ENST00000414112 510 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 SNRPFP3-201ENST00000457792 225 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC022795.1-201ENST00000473808 480 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC083904.1-201ENST00000487828 231 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC025164.1-201ENST00000496249 478 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 Y_RNA.654-201ENST00000497848 106 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC140172.1-201ENST00000502928 141 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 OR7H2P-201ENST00000513483 306 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 MTND4P7-201ENST00000523876 130 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AP000857.1-201ENST00000532151 543 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC018630.1-201ENST00000541376 925 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC123786.2-201ENST00000603459 275 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AL590099.1-201ENST00000615276 138 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 MIR6810-201ENST00000622701 70 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 AC244517.12-201ENST00000623581 663 ntBASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
FOXP3Q9BZS1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 EOGT-210ENST00000615922 1931 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AL592182.3-201ENST00000642132 3304 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 Y_RNA.378-201ENST00000365652 113 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 RNA5SP372-201ENST00000390836 115 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AL049697.2-201ENST00000403708 294 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 RPS4XP9-201ENST00000405151 780 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 RNU6-370P-201ENST00000411008 104 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 FAR2P2-201ENST00000413041 594 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC113618.1-201ENST00000416747 285 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 FAR2P4-202ENST00000425399 584 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AL359265.2-201ENST00000434367 631 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AC127537.2-201ENST00000439258 465 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 RPL32P28-201ENST00000443577 397 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 TPT1P13-201ENST00000449760 499 ntBASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FOXP3Q9BZS1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms