Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC018630.1-201ENST00000541376 925 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AL049779.4-201ENST00000604500 156 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC067747.1-201ENST00000608026 250 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC008083.4-201ENST00000615076 444 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AL109659.3-201ENST00000624985 950 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 AC092608.3-201ENST00000625017 386 ntBASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.84□□□□□ -1.95
UPF3BQ9BZI7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC244517.1-201ENST00000606030 2086 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 RNU6-543P-201ENST00000362576 108 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 SNORA1.3-201ENST00000384676 136 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 RNU4-78P-201ENST00000410940 126 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 HMGN2P30-201ENST00000423237 256 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC114973.1-201ENST00000429057 632 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AL139415.2-201ENST00000431968 163 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC004022.1-201ENST00000447766 1066 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AL590664.1-201ENST00000448065 339 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 SETP11-201ENST00000473027 690 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 FAM172BP-201ENST00000487497 1089 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 MTCO3P44-201ENST00000510977 541 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC022069.1-201ENST00000582910 658 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 XIAPP1-201ENST00000603162 600 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC007621.1-201ENST00000604544 437 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC140725.3-201ENST00000616193 880 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 VN1R7P-201ENST00000619242 903 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC007275.1-201ENST00000621243 671 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AC095031.1-201ENST00000623685 672 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 AL160394.1-201ENST00000624765 724 ntBASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UPF3BQ9BZI7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC138915.1-201ENST00000565427 1685 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 RNU6-1249P-201ENST00000363237 111 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 OR51A3P-201ENST00000413596 924 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC009963.1-201ENST00000417265 157 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 DPH3P2-201ENST00000422618 250 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC096632.1-201ENST00000427395 310 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 RPL21P99-201ENST00000480369 423 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 LINC00888-204ENST00000487386 421 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC026436.1-201ENST00000510537 270 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 RNA5SP458-201ENST00000516188 119 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC083923.1-201ENST00000523708 376 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC078814.3-201ENST00000553036 491 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 NBEAP1-201ENST00000554452 979 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AC013468.1-201ENST00000608680 598 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 AL356118.1-201ENST00000635272 1078 ntBASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
UPF3BQ9BZI7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 RNU6-272P-201ENST00000411028 104 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 AL356320.1-201ENST00000429616 163 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 UBE2V1P5-201ENST00000440070 405 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 AC015724.1-201ENST00000478577 156 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 AC096751.1-202ENST00000502691 1067 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 SNORA31.15-201ENST00000516771 132 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 AC007938.3-201ENST00000604965 623 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 AC046143.2-201ENST00000609789 160 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 CR589904.2-201ENST00000612533 440 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 MIR1291-201ENST00000627649 87 ntBASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
UPF3BQ9BZI7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms