Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 COX6CP12-201ENST00000446748 202 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC104073.1-201ENST00000451988 151 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 HMGN3P1-201ENST00000453847 193 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 SNORD109B-201ENST00000458961 67 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 SNORD109A-201ENST00000459128 67 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 VPS26AP1-201ENST00000483197 979 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC079804.2-201ENST00000490376 200 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC080014.1-201ENST00000496877 1201 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AP003102.1-201ENST00000525638 661 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC123904.3-201ENST00000547218 814 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC027104.1-201ENST00000563702 681 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC105137.2-201ENST00000569073 466 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC002984.1-201ENST00000591692 448 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC025588.3-201ENST00000604182 274 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 APOOP1-201ENST00000604695 592 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AL121917.1-203ENST00000605534 577 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AL161629.2-201ENST00000615347 275 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC025588.4-201ENST00000615802 908 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC107905.1-201ENST00000616204 426 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC068722.2-201ENST00000618734 544 ntBASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.47□□□□□ -2.17
LIMD2Q9BT23 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 CKAP2P1-201ENST00000555477 2049 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 SNORA3A-201ENST00000364113 130 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 RNU6-444P-201ENST00000383988 108 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 MIR128-1-201ENST00000384921 82 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AL356379.1-201ENST00000414105 126 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC009414.1-201ENST00000427200 443 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 OR4K11P-201ENST00000431829 904 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC004866.2-201ENST00000438285 481 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AL714022.1-201ENST00000439897 151 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 UBE2V1P5-201ENST00000440070 405 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC116337.2-201ENST00000477662 156 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 RPS27P26-201ENST00000494583 239 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 EIF4EP3-201ENST00000498782 656 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC026801.2-201ENST00000515352 425 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 RNU6-202P-201ENST00000515998 96 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 RNU6-889P-201ENST00000517189 103 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC025755.1-201ENST00000521306 278 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC083923.1-201ENST00000523708 376 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 HAUS1P3-201ENST00000523909 662 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC243972.3-201ENST00000539655 198 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 MTCO1P40-201ENST00000574371 625 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 LARP7P3-201ENST00000579888 337 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 MIR3117-201ENST00000584034 78 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC008749.1-201ENST00000597650 306 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC012669.1-201ENST00000603209 283 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AL356280.1-201ENST00000603614 379 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 ATP1B3P1-201ENST00000605365 821 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC025016.1-201ENST00000616746 682 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC024595.1-201ENST00000623088 387 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AC097714.1-201ENST00000511272 1647 ntBASIC1.46□□□□□ -2.18
LIMD2Q9BT23 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.46□□□□□ -2.18
LIMD2Q9BT23 AL109809.4-201ENST00000603520 2185 ntBASIC1.45□□□□□ -2.18
LIMD2Q9BT23 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.45□□□□□ -2.18
LIMD2Q9BT23 OR56A5-201ENST00000340110 738 ntBASIC1.45□□□□□ -2.18
LIMD2Q9BT23 RNU1-105P-201ENST00000363470 161 ntBASIC1.45□□□□□ -2.18
LIMD2Q9BT23 RNA5SP456-201ENST00000364002 114 ntBASIC1.45□□□□□ -2.18
LIMD2Q9BT23 RNU1-112P-201ENST00000364401 164 ntBASIC1.45□□□□□ -2.18
LIMD2Q9BT23 SNORA16B-201ENST00000364674 135 ntBASIC1.45□□□□□ -2.18
LIMD2Q9BT23 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LIMD2Q9BT23 RNU6-198P-201ENST00000384258 104 ntBASIC1.45□□□□□ -2.18
LIMD2Q9BT23 MIR649-201ENST00000384843 97 ntBASIC1.45□□□□□ -2.18
LIMD2Q9BT23 MIR27B-201ENST00000385129 97 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms