Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 KC877982.1-201ENST00000602313 470 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 MIR6076-201ENST00000617521 113 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 XIST_intron.1-201ENST00000619444 68 ntBASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERPUD2Q9BSE4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
HERPUD2Q9BSE4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 LINC02471-203ENST00000641941 4752 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 SNORA1.3-201ENST00000384676 136 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 SOD2P1-201ENST00000396543 562 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AL590704.1-201ENST00000402856 794 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 FCF1P10-201ENST00000407590 479 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 HMGB3P23-201ENST00000414981 585 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC009518.2-201ENST00000418056 731 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AL390023.1-201ENST00000428836 262 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 USP12PX-201ENST00000432383 1057 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 NEK4P1-201ENST00000433383 879 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC092573.2-201ENST00000434546 243 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 TIMM9P1-201ENST00000436122 256 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 RPL21P89-201ENST00000444021 467 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC009237.8-201ENST00000445492 379 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 RAC1P2-201ENST00000511164 579 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 RNU6-1256P-201ENST00000516539 103 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 RNU6-352P-201ENST00000516908 107 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC022616.6-201ENST00000520479 119 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 MIR3146-201ENST00000580367 79 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC020914.4-201ENST00000597690 277 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AL590229.1-201ENST00000603497 542 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC008277.2-201ENST00000605196 797 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 BRDTP1-201ENST00000605735 677 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC245517.5-201ENST00000611529 162 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 AC006111.3-201ENST00000622137 383 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.02□□□□□ -1.77
HERPUD2Q9BSE4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC091152.2-201ENST00000591628 2569 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 MIR372-201ENST00000362225 67 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 SNORD115.1-201ENST00000391109 76 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 RNA5SP107-201ENST00000411358 122 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 NPM1P11-201ENST00000417106 855 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC006366.1-201ENST00000422002 759 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AL691449.1-201ENST00000426570 421 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 RPL30P14-201ENST00000482744 348 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 HIGD1AP10-201ENST00000527837 282 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC005951.2-201ENST00000576282 495 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 MIR4286-201ENST00000580651 93 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC012065.4-201ENST00000602445 679 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 MIR8058-201ENST00000615737 89 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC103858.2-201ENST00000621471 543 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 AC025048.6-202ENST00000627667 438 ntBASIC4.01□□□□□ -1.77
HERPUD2Q9BSE4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms