Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC116337.1-201ENST00000509680 687 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 Y_RNA.661-201ENST00000516003 99 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC022360.1-201ENST00000521058 340 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 HMGB1P40-201ENST00000525121 540 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC126177.5-201ENST00000549599 178 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC127381.1-201ENST00000555979 939 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 MIR3941-201ENST00000582572 103 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 PRR13P7-201ENST00000605538 430 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 TUG1_2.1-201ENST00000614234 87 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AC007485.1-201ENST00000616755 206 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 AL139811.1-201ENST00000424779 2299 ntBASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM56Q9BRZ2 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 RN7SKP153-201ENST00000365026 316 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 RNU6-128P-201ENST00000383976 107 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 Y_RNA.463-201ENST00000384271 102 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 MIR937-201ENST00000401271 86 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 HMGB3P2-201ENST00000411913 584 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 UBE2FP1-201ENST00000416536 447 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 EI24P4-201ENST00000423683 1078 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AL121871.1-201ENST00000443413 436 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 RPL21P23-201ENST00000446654 460 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AC008481.1-201ENST00000463278 396 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 RPL5P30-201ENST00000465511 891 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AC026801.2-201ENST00000515352 425 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 Y_RNA.708-201ENST00000516950 96 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AL161713.1-201ENST00000555538 145 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 MYL12BP1-201ENST00000569826 507 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AC174048.1-201ENST00000603389 144 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 AC093535.2-201ENST00000624769 2326 ntBASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM56Q9BRZ2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 SNORA58B-201ENST00000364259 136 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 GLULP6-201ENST00000399502 913 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 MIR1286-201ENST00000408112 78 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 RNA5SP487-201ENST00000410186 122 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 BX682237.1-201ENST00000415016 335 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 NRBF2P3-201ENST00000432731 865 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 CFL1P1-202ENST00000432948 411 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 MRPS18BP2-201ENST00000434310 759 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 RN7SL727P-201ENST00000482164 296 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 RN7SL591P-201ENST00000496150 292 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 AC010350.1-201ENST00000504908 231 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 RNU6-685P-201ENST00000517088 95 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 RNU1-54P-201ENST00000517181 120 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 AC073539.2-201ENST00000597113 165 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 AL138889.2-201ENST00000603883 242 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 AC006157.1-201ENST00000611750 366 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 MIR6128-201ENST00000615528 109 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 U73479.1-201ENST00000618062 168 ntBASIC5.25□□□□□ -1.57
TRIM56Q9BRZ2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms