Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 TRIAP1P1-201ENST00000427062 225 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.46□□□□□ -2.18
COL12A1Q99715 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.46□□□□□ -2.18
COL12A1Q99715 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 AC107294.3-201ENST00000609211 526 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
COL12A1Q99715 AC025016.1-201ENST00000616746 682 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
COL12A1Q99715 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.46□□□□□ -2.18
COL12A1Q99715 SETP8-201ENST00000435341 628 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.46□□□□□ -2.18
COL12A1Q99715 RNA5SP337-201ENST00000517007 109 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL12A1Q99715 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.46□□□□□ -2.18
COL12A1Q99715 HMGB1P45-201ENST00000435986 653 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 SUMO2P6-201ENST00000505273 288 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 AC108078.1-201ENST00000508073 725 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 AC060766.3-201ENST00000591442 263 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 AC068944.2-201ENST00000610373 403 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.46□□□□□ -2.18
COL12A1Q99715 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.45□□□□□ -2.18
COL12A1Q99715 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL12A1Q99715 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL12A1Q99715 HMGN2P19-201ENST00000425149 265 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 XKRY2-201ENST00000442362 1093 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 HMGN2P18-201ENST00000450680 270 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.45□□□□□ -2.18
COL12A1Q99715 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.45□□□□□ -2.18
COL12A1Q99715 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 AC023825.1-201ENST00000566704 1030 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 AC103810.1-201ENST00000579873 453 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.45□□□□□ -2.18
COL12A1Q99715 AC074140.1-201ENST00000621617 208 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.45□□□□□ -2.18
COL12A1Q99715 RNU6-174P-201ENST00000410406 106 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.45□□□□□ -2.18
COL12A1Q99715 AC009474.2-201ENST00000451383 136 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 RPS26P24-201ENST00000497656 331 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 GOLGA5P1-201ENST00000507317 980 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.45□□□□□ -2.18
COL12A1Q99715 FABP5P5-201ENST00000515537 406 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 RNA5SP436-201ENST00000516020 115 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL12A1Q99715 AC013444.2-201ENST00000603317 787 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 AC008121.3-201ENST00000618726 433 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 FAM35CP-201ENST00000554755 2470 ntBASIC1.45□□□□□ -2.18
COL12A1Q99715 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL12A1Q99715 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL12A1Q99715 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.44□□□□□ -2.18
COL12A1Q99715 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.44□□□□□ -2.18
COL12A1Q99715 AC073310.1-201ENST00000423226 1033 ntBASIC1.44□□□□□ -2.18
COL12A1Q99715 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL12A1Q99715 SULT1C2P1-202ENST00000562418 459 ntBASIC1.44□□□□□ -2.18
COL12A1Q99715 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.44□□□□□ -2.18
COL12A1Q99715 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.44□□□□□ -2.18
COL12A1Q99715 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.44□□□□□ -2.18
COL12A1Q99715 SNORA26.7-201ENST00000391288 122 ntBASIC1.44□□□□□ -2.18
COL12A1Q99715 RNU1-139P-201ENST00000391307 165 ntBASIC1.44□□□□□ -2.18
COL12A1Q99715 AL121972.1-201ENST00000402023 252 ntBASIC1.44□□□□□ -2.18
COL12A1Q99715 AC021087.2-201ENST00000504656 1203 ntBASIC1.44□□□□□ -2.18
COL12A1Q99715 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.44□□□□□ -2.18
COL12A1Q99715 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.44□□□□□ -2.18
COL12A1Q99715 AC012640.5-201ENST00000623897 319 ntBASIC1.44□□□□□ -2.18
COL12A1Q99715 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL12A1Q99715 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL12A1Q99715 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.44□□□□□ -2.18
COL12A1Q99715 EIF1AXP1-201ENST00000419267 435 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AC023128.2-201ENST00000420880 1223 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 AC129850.1-201ENST00000436203 508 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AL049830.2-201ENST00000480072 201 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 SUMO2P4-201ENST00000504193 276 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AL137847.3-201ENST00000611521 109 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 NUP58P1-201ENST00000502546 1738 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 UBE2L2-201ENST00000254302 429 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 SNORD114-27-201ENST00000363766 70 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 RPL31P2-201ENST00000413849 377 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.43□□□□□ -2.18
COL12A1Q99715 RPL39P40-201ENST00000445481 146 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AC021382.1-201ENST00000483523 359 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AC087241.2-201ENST00000535801 324 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 FAM106DP-201ENST00000586416 501 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 DDX43P2-201ENST00000604753 1354 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
COL12A1Q99715 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AL021368.2-201ENST00000606125 5352 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
COL12A1Q99715 RPL30P3-201ENST00000424262 333 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL12A1Q99715 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COL12A1Q99715 AL359273.1-201ENST00000510918 627 ntBASIC1.43□□□□□ -2.18
COL12A1Q99715 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.43□□□□□ -2.18
COL12A1Q99715 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms