Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VAT1Q99536 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
VAT1Q99536 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.51□□□□□ -2.01
VAT1Q99536 HMGB1P6-201ENST00000569046 646 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AC245036.5-201ENST00000596330 847 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AC010738.1-201ENST00000604970 987 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AC019159.1-201ENST00000605094 187 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AC012467.1-201ENST00000607740 256 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AC020658.4-201ENST00000613987 684 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AC008083.4-201ENST00000615076 444 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AL118508.4-201ENST00000624142 1176 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.51□□□□□ -2.01
VAT1Q99536 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.51□□□□□ -2.01
VAT1Q99536 AC016717.2-201ENST00000609089 5141 ntBASIC2.51□□□□□ -2.01
VAT1Q99536 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
VAT1Q99536 ZNF849P-201ENST00000594711 1566 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
VAT1Q99536 U8.8-201ENST00000365399 135 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.5□□□□□ -2.01
VAT1Q99536 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VAT1Q99536 AL359511.1-201ENST00000402970 211 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AC098826.1-201ENST00000433943 471 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AC234064.1-201ENST00000436312 247 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.5□□□□□ -2.01
VAT1Q99536 AL831737.1-201ENST00000441288 271 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.5□□□□□ -2.01
VAT1Q99536 GXYLT1P1-201ENST00000446657 490 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VAT1Q99536 AL589880.1-201ENST00000448271 287 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.5□□□□□ -2.01
VAT1Q99536 RPS29P12-201ENST00000460178 152 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AC133134.1-201ENST00000466800 359 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AC006390.1-201ENST00000508068 283 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VAT1Q99536 AC118282.2-201ENST00000508739 374 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 SNORA70.16-201ENST00000516390 95 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 RNU6-885P-201ENST00000516607 104 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 OR10V3P-201ENST00000525712 725 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.5□□□□□ -2.01
VAT1Q99536 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.5□□□□□ -2.01
VAT1Q99536 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.5□□□□□ -2.01
VAT1Q99536 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.5□□□□□ -2.01
VAT1Q99536 AP003485.2-201ENST00000623636 610 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AC010297.1-201ENST00000623948 149 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 AL121594.5-201ENST00000631724 573 ntBASIC2.5□□□□□ -2.01
VAT1Q99536 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.5□□□□□ -2.01
VAT1Q99536 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.5□□□□□ -2.01
VAT1Q99536 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VAT1Q99536 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.49□□□□□ -2.01
VAT1Q99536 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VAT1Q99536 SNORA5B-201ENST00000363786 132 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 RNA5SP68-201ENST00000363885 119 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 SNORD56.5-201ENST00000364281 72 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.49□□□□□ -2.01
VAT1Q99536 AC016769.3-201ENST00000396562 315 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 MTCO2P31-201ENST00000402702 684 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.49□□□□□ -2.01
VAT1Q99536 RPL7P30-201ENST00000420888 709 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 HMGN2P30-201ENST00000423237 256 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 AC004866.2-201ENST00000438285 481 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 UBBP3-201ENST00000445497 241 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.49□□□□□ -2.01
VAT1Q99536 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.49□□□□□ -2.01
VAT1Q99536 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.49□□□□□ -2.01
VAT1Q99536 MTND5P4-201ENST00000514978 288 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 RNA5SP135-201ENST00000517019 125 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VAT1Q99536 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VAT1Q99536 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.49□□□□□ -2.01
VAT1Q99536 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.49□□□□□ -2.01
VAT1Q99536 SULT1C2P1-202ENST00000562418 459 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VAT1Q99536 AC025281.1-201ENST00000567026 265 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 MIR4446-201ENST00000578505 67 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.49□□□□□ -2.01
VAT1Q99536 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.49□□□□□ -2.01
VAT1Q99536 AL022099.1-201ENST00000604551 712 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.49□□□□□ -2.01
VAT1Q99536 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.49□□□□□ -2.01
VAT1Q99536 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VAT1Q99536 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VAT1Q99536 GDI2P1-201ENST00000429312 1336 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 AC138915.1-201ENST00000565427 1685 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.48□□□□□ -2.01
VAT1Q99536 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VAT1Q99536 RNU6-173P-201ENST00000364215 104 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 RNU6-353P-201ENST00000364266 108 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 SNORD114-30-201ENST00000364448 72 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 SNORD51-201ENST00000384320 80 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 MIR518C-201ENST00000384822 101 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 U3.26-201ENST00000391236 204 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 FO393413.1-201ENST00000402892 195 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.48□□□□□ -2.01
VAT1Q99536 SFR1P2-201ENST00000421841 730 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 TMEM167AP1-201ENST00000423409 219 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 FCF1P1-201ENST00000432690 571 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.48□□□□□ -2.01
VAT1Q99536 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.48□□□□□ -2.01
VAT1Q99536 AC108938.1-201ENST00000451204 136 ntBASIC2.48□□□□□ -2.01
VAT1Q99536 RPS3P1-201ENST00000456781 192 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms