Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.87□□□□□ -1.95
IFT140Q96RY7 AL358075.3-201ENST00000426289 226 ntBASIC2.87□□□□□ -1.95
IFT140Q96RY7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
IFT140Q96RY7 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.87□□□□□ -1.95
IFT140Q96RY7 SNORD116-26-201ENST00000516006 96 ntBASIC2.87□□□□□ -1.95
IFT140Q96RY7 MIR6895-201ENST00000613497 78 ntBASIC2.87□□□□□ -1.95
IFT140Q96RY7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.87□□□□□ -1.95
IFT140Q96RY7 AC234782.4-201ENST00000417646 1048 ntBASIC2.86□□□□□ -1.95
IFT140Q96RY7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.86□□□□□ -1.95
IFT140Q96RY7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.86□□□□□ -1.95
IFT140Q96RY7 AP000790.1-201ENST00000528891 737 ntBASIC2.86□□□□□ -1.95
IFT140Q96RY7 RPS3AP23-202ENST00000574601 686 ntBASIC2.86□□□□□ -1.95
IFT140Q96RY7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.86□□□□□ -1.95
IFT140Q96RY7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
IFT140Q96RY7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 ARPC3P1-201ENST00000437218 533 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 BNIP3P2-201ENST00000441221 577 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 AC009474.2-201ENST00000451383 136 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 AC109471.1-201ENST00000511631 612 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 PTP4A1P6-201ENST00000531034 478 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 AC010735.1-201ENST00000567305 1026 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 AC006270.2-201ENST00000578523 652 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 SNORD39.2-201ENST00000579995 76 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 MIR6779-201ENST00000617283 64 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.85□□□□□ -1.95
IFT140Q96RY7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
IFT140Q96RY7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
IFT140Q96RY7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
IFT140Q96RY7 RNU6-1027P-201ENST00000383998 107 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.84□□□□□ -1.95
IFT140Q96RY7 MTCO1P43-201ENST00000431831 488 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 AC090453.1-201ENST00000495560 436 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 AC090071.1-201ENST00000507713 644 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 RN7SKP5-201ENST00000517045 272 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.84□□□□□ -1.95
IFT140Q96RY7 AP002748.2-201ENST00000528671 348 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 AL121917.1-203ENST00000605534 577 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 LINC00216-201ENST00000623548 1126 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 CFTRP2-201ENST00000634304 199 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.84□□□□□ -1.95
IFT140Q96RY7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
IFT140Q96RY7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
IFT140Q96RY7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
IFT140Q96RY7 UBE2L2-201ENST00000254302 429 ntBASIC2.84□□□□□ -1.96
IFT140Q96RY7 MIRLET7G-201ENST00000362280 84 ntBASIC2.84□□□□□ -1.96
IFT140Q96RY7 MIR613-201ENST00000385248 95 ntBASIC2.84□□□□□ -1.96
IFT140Q96RY7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 AC023128.2-201ENST00000420880 1223 ntBASIC2.84□□□□□ -1.96
IFT140Q96RY7 AC005517.2-201ENST00000424673 553 ntBASIC2.84□□□□□ -1.96
IFT140Q96RY7 AL645568.3-201ENST00000433683 316 ntBASIC2.84□□□□□ -1.96
IFT140Q96RY7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 AC007375.1-201ENST00000554513 578 ntBASIC2.84□□□□□ -1.96
IFT140Q96RY7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 MIR4458-201ENST00000578872 75 ntBASIC2.84□□□□□ -1.96
IFT140Q96RY7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.84□□□□□ -1.96
IFT140Q96RY7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
IFT140Q96RY7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
IFT140Q96RY7 METTL21EP-201ENST00000298105 713 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
IFT140Q96RY7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.83□□□□□ -1.96
IFT140Q96RY7 NAP1L4P3-201ENST00000432820 1147 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 XKRY2-201ENST00000442362 1093 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 HMGB3P21-201ENST00000452483 547 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.83□□□□□ -1.96
IFT140Q96RY7 SNORA31.15-201ENST00000516771 132 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 AC239860.2-201ENST00000525886 270 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 AP004242.1-201ENST00000533701 349 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.83□□□□□ -1.96
IFT140Q96RY7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 AC090617.7-201ENST00000623952 126 ntBASIC2.83□□□□□ -1.96
IFT140Q96RY7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
IFT140Q96RY7 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.82□□□□□ -1.96
IFT140Q96RY7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.82□□□□□ -1.96
IFT140Q96RY7 ZNF271P-202ENST00000465539 1970 ntBASIC2.82□□□□□ -1.96
IFT140Q96RY7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
IFT140Q96RY7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.82□□□□□ -1.96
IFT140Q96RY7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
IFT140Q96RY7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.82□□□□□ -1.96
IFT140Q96RY7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
IFT140Q96RY7 CASP3P1-201ENST00000446037 609 ntBASIC2.82□□□□□ -1.96
IFT140Q96RY7 MTCYBP37-201ENST00000510642 1133 ntBASIC2.82□□□□□ -1.96
IFT140Q96RY7 HMGB1P47-201ENST00000511281 589 ntBASIC2.82□□□□□ -1.96
IFT140Q96RY7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.82□□□□□ -1.96
IFT140Q96RY7 MIR4421-201ENST00000578133 69 ntBASIC2.82□□□□□ -1.96
IFT140Q96RY7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.82□□□□□ -1.96
IFT140Q96RY7 RMST_6.1-201ENST00000611980 203 ntBASIC2.82□□□□□ -1.96
IFT140Q96RY7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
IFT140Q96RY7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.81□□□□□ -1.96
IFT140Q96RY7 RNU6-53P-201ENST00000365367 106 ntBASIC2.81□□□□□ -1.96
IFT140Q96RY7 MTND4LP13-201ENST00000425022 298 ntBASIC2.81□□□□□ -1.96
IFT140Q96RY7 AC104308.1-201ENST00000454621 333 ntBASIC2.81□□□□□ -1.96
IFT140Q96RY7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.81□□□□□ -1.96
IFT140Q96RY7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms