Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC007327.1-201ENST00000447461 264 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 RPL39P6-201ENST00000448289 150 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AL139824.2-201ENST00000458731 1095 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 RNA5SP310-201ENST00000459084 116 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 RN7SL75P-201ENST00000461926 281 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 RPS15AP17-201ENST00000470598 390 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC00477Q96M19 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC093767.1-201ENST00000504523 156 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC006499.5-201ENST00000505037 514 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC079395.1-201ENST00000510981 262 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC093677.1-201ENST00000514414 678 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC087373.1-201ENST00000524920 491 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 SLC2A13P1-201ENST00000531560 322 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC018630.1-201ENST00000541376 925 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 LRRC34P1-201ENST00000542742 915 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC087481.2-201ENST00000565492 330 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC061975.8-201ENST00000587058 721 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 GLUD1P4-201ENST00000590914 418 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC020895.1-201ENST00000595362 272 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 VN1R78P-201ENST00000597393 564 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 XIAPP1-201ENST00000603162 600 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC012669.1-201ENST00000603209 283 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 NUTF2P8-201ENST00000604593 363 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC106791.2-201ENST00000604680 391 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AL139344.1-201ENST00000605228 195 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AL158042.1-201ENST00000605338 460 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC138932.5-201ENST00000617759 563 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AL355493.4-201ENST00000618530 292 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 MIR622-201ENST00000638396 96 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AP000526.1-201ENST00000603308 1388 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LINC00477Q96M19 MTND5P19-201ENST00000424872 1794 ntBASIC2.33□□□□□ -2.04
LINC00477Q96M19 AC093831.2-201ENST00000624393 3427 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC00477Q96M19 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC008264.2-201ENST00000610193 3731 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC00477Q96M19 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LINC00477Q96M19 RPL23AP57-201ENST00000332361 466 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 Y_RNA.25-201ENST00000362528 102 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 RNU1-33P-201ENST00000364249 162 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
LINC00477Q96M19 RNU6-157P-201ENST00000383957 107 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 RNU1-109P-201ENST00000383960 147 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 PIGPP2-201ENST00000411569 458 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC011233.1-201ENST00000422812 283 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AL050321.1-201ENST00000432363 400 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 MTND1P32-201ENST00000433043 938 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AL359073.1-201ENST00000448036 403 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 HMGN3P1-201ENST00000453847 193 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 HMGB1P36-201ENST00000487709 576 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 RPL7P23-201ENST00000493874 747 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 HSPD1P15-201ENST00000505573 1122 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC006499.2-201ENST00000513470 337 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 RNU6-27P-201ENST00000516146 107 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 ARL2BPP5-201ENST00000523141 481 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 ZNF705CP-201ENST00000530515 889 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 MTCYBP27-201ENST00000555160 670 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AP005205.1-201ENST00000563503 508 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC034105.4-201ENST00000568304 277 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 BNIP3P26-201ENST00000600827 554 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AL109618.2-201ENST00000605527 211 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AC013244.3-201ENST00000605614 388 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 AL513477.2-201ENST00000607858 568 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 MIR1322-201ENST00000638013 71 ntBASIC2.32□□□□□ -2.04
LINC00477Q96M19 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.32□□□□□ -2.04
LINC00477Q96M19 ZNF519P1-201ENST00000449011 1626 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC00477Q96M19 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC00477Q96M19 RNU6-1214P-201ENST00000363650 109 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 RNU6-621P-201ENST00000364752 109 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 RNU6-761P-201ENST00000384148 107 ntBASIC2.31□□□□□ -2.04
LINC00477Q96M19 PTMAP2-201ENST00000397627 327 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms