Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AP003485.2-201ENST00000623636 610 ntBASIC2.74□□□□□ -1.97
C9orf72Q96LT7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.74□□□□□ -1.97
C9orf72Q96LT7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.74□□□□□ -1.97
C9orf72Q96LT7 CYP3A51P-201ENST00000633513 256 ntBASIC2.74□□□□□ -1.97
C9orf72Q96LT7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
C9orf72Q96LT7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
C9orf72Q96LT7 MTCO1P23-201ENST00000415223 1526 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 RNU1-109P-201ENST00000383960 147 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 SNORD51-201ENST00000384320 80 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 RNU6-549P-201ENST00000384433 107 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 SNORA1.3-201ENST00000384676 136 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 RPL17P35-201ENST00000432217 549 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC004866.2-201ENST00000438285 481 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC091860.1-201ENST00000505723 432 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 RPL23AP94-201ENST00000512518 302 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 OR7K1P-201ENST00000546439 926 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC090502.2-201ENST00000549267 280 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 MIR4319-201ENST00000577285 85 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 VN1R90P-201ENST00000595717 726 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC245036.5-201ENST00000596330 847 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AP000787.2-201ENST00000604432 568 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 NUTF2P8-201ENST00000604593 363 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 OR2AS2P-201ENST00000606902 342 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC091948.2-201ENST00000636510 279 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
C9orf72Q96LT7 AC006378.2-201ENST00000623178 2476 ntBASIC2.73□□□□□ -1.97
C9orf72Q96LT7 SNORD56.5-201ENST00000364281 72 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 RNU6-657P-201ENST00000383904 107 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AL136372.1-201ENST00000403060 228 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AL355615.1-201ENST00000406187 641 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 RNA5SP184-201ENST00000411071 108 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 DBF4P1-201ENST00000412976 1892 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 UBBP3-201ENST00000445497 241 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC117522.3-201ENST00000507974 584 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 MTCO1P4-201ENST00000520516 1409 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC027309.2-201ENST00000520566 192 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC100870.1-201ENST00000522035 505 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 OR8K2P-201ENST00000524645 927 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC068339.2-201ENST00000534395 618 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC123904.3-201ENST00000547218 814 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC090695.1-201ENST00000561269 1222 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 MIR3162-201ENST00000581818 82 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AL390838.2-201ENST00000602394 274 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AL356575.1-201ENST00000603008 283 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC012443.1-201ENST00000605605 231 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 AC092954.1-201ENST00000609121 445 ntBASIC2.72□□□□□ -1.97
C9orf72Q96LT7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
C9orf72Q96LT7 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.71□□□□□ -1.97
C9orf72Q96LT7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AC062016.1-201ENST00000355719 319 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 SNORA25.6-201ENST00000364121 118 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AL035405.1-201ENST00000400795 710 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 RNU2-28P-201ENST00000410457 189 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AC092634.6-201ENST00000418558 192 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 MTCO3P1-205ENST00000422088 832 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AL158053.1-201ENST00000441503 453 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 AC013828.1-201ENST00000481845 158 ntBASIC2.71□□□□□ -1.98
C9orf72Q96LT7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.71□□□□□ -1.98
C9orf72Q96LT7 SNORA70.16-201ENST00000516390 95 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms