Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AP000787.2-201ENST00000604432 568 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 AC006023.2-201ENST00000609916 167 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.17□□□□□ -1.9
USP47Q96K76 AC097460.3-201ENST00000623099 442 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
USP47Q96K76 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
USP47Q96K76 RNA5SP56-201ENST00000410277 118 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 RNU2-71P-201ENST00000411395 189 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.16□□□□□ -1.9
USP47Q96K76 AL096803.2-201ENST00000450032 677 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 TRBV26-201ENST00000456572 344 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 snoU13.3-201ENST00000459441 104 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.16□□□□□ -1.9
USP47Q96K76 AC011352.3-201ENST00000505162 593 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 HMGB1P22-201ENST00000505315 124 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 PRELID3BP4-201ENST00000515476 571 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 AP001317.1-201ENST00000531194 960 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.16□□□□□ -1.9
USP47Q96K76 AC010735.1-201ENST00000567305 1026 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.16□□□□□ -1.9
USP47Q96K76 AC013468.1-201ENST00000608680 598 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.16□□□□□ -1.9
USP47Q96K76 AC020923.1-201ENST00000624021 917 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 AC098679.5-201ENST00000624394 571 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 AC026634.1-201ENST00000634369 198 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
USP47Q96K76 AC006378.2-201ENST00000623178 2476 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 MTND5P31-201ENST00000419366 1374 ntBASIC3.16□□□□□ -1.9
USP47Q96K76 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.15□□□□□ -1.9
USP47Q96K76 RNU6-1181P-201ENST00000384191 106 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 MIR221-201ENST00000385135 110 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 AC104454.1-201ENST00000421341 1401 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 AC009237.2-201ENST00000421358 284 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 PTP4A1P7-201ENST00000423476 514 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 AC092427.1-202ENST00000430569 476 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.15□□□□□ -1.9
USP47Q96K76 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
USP47Q96K76 HSFY3P-201ENST00000444242 1191 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.15□□□□□ -1.9
USP47Q96K76 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.15□□□□□ -1.9
USP47Q96K76 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
USP47Q96K76 AC074051.3-201ENST00000570238 358 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 BPTFP1-201ENST00000579209 492 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 RN7SL622P-201ENST00000585292 275 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 AL590282.1-201ENST00000610379 1136 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 AL359198.2-201ENST00000611836 194 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 AC099063.3-201ENST00000642066 185 ntBASIC3.15□□□□□ -1.9
USP47Q96K76 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP47Q96K76 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
USP47Q96K76 RNU1-91P-201ENST00000364746 163 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 MIR649-201ENST00000384843 97 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 RNU6-837P-201ENST00000391056 108 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AL079342.1-201ENST00000401460 267 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AP000567.1-201ENST00000406413 156 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.14□□□□□ -1.91
USP47Q96K76 AL606495.1-201ENST00000422100 813 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 RPS7P2-201ENST00000435134 607 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AL590762.3-201ENST00000436372 640 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.14□□□□□ -1.91
USP47Q96K76 RPL7P52-201ENST00000449200 742 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 HMGB1P15-201ENST00000453854 435 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 GTF2IP12-201ENST00000456547 356 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AC010285.1-201ENST00000470580 392 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.14□□□□□ -1.91
USP47Q96K76 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.14□□□□□ -1.91
USP47Q96K76 MTCO2P32-201ENST00000514865 403 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.14□□□□□ -1.91
USP47Q96K76 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.14□□□□□ -1.91
USP47Q96K76 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.14□□□□□ -1.91
USP47Q96K76 AC011611.5-201ENST00000552477 578 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.14□□□□□ -1.91
USP47Q96K76 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.14□□□□□ -1.91
USP47Q96K76 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.14□□□□□ -1.91
USP47Q96K76 NIFKP8-201ENST00000560500 874 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AL669831.4-202ENST00000590817 238 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.14□□□□□ -1.91
USP47Q96K76 AL021368.1-201ENST00000607490 540 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
USP47Q96K76 AC092184.1-201ENST00000625042 715 ntBASIC3.14□□□□□ -1.91
USP47Q96K76 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.14□□□□□ -1.91
USP47Q96K76 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.14□□□□□ -1.91
USP47Q96K76 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP47Q96K76 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.13□□□□□ -1.91
USP47Q96K76 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.13□□□□□ -1.91
USP47Q96K76 NAP1L1P3-201ENST00000462291 880 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 RPL9P6-201ENST00000492764 598 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
USP47Q96K76 HMGB1P1-201ENST00000522557 636 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 AP003385.6-201ENST00000531603 374 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 AC012182.1-201ENST00000570133 895 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.13□□□□□ -1.91
USP47Q96K76 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.13□□□□□ -1.91
USP47Q96K76 AC009831.4-201ENST00000620744 325 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.13□□□□□ -1.91
USP47Q96K76 AC091948.2-201ENST00000636510 279 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 AC117529.2-201ENST00000512159 2068 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 MTCO1P9-201ENST00000505577 1534 ntBASIC3.13□□□□□ -1.91
USP47Q96K76 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.13□□□□□ -1.91
USP47Q96K76 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms