Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AC006960.3-201ENST00000561845 705 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AL391840.1-201ENST00000571144 367 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 MTATP6P3-201ENST00000581686 676 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 MIR3118-1-201ENST00000581787 76 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AL022154.1-201ENST00000604698 785 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AL356585.4-201ENST00000623078 1229 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 AC091953.2-201ENST00000623979 160 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 OR5H6-203ENST00000642105 978 ntBASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDK5RAP3Q96JB5 USP8P1-201ENST00000494673 3183 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC106871.1-201ENST00000568324 3102 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 RNA5SP235-201ENST00000365411 114 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC068538.1-201ENST00000376856 336 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC127391.1-201ENST00000411737 98 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 RANP8-201ENST00000444720 713 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 RBM43P1-201ENST00000476891 1081 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC022483.1-201ENST00000514020 567 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 RNA5SP179-201ENST00000517284 121 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC107934.1-201ENST00000522215 217 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC136619.2-201ENST00000563361 631 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC099489.2-201ENST00000574976 260 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AL139395.1-201ENST00000603662 160 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AL161734.1-201ENST00000609720 557 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AL133173.2-201ENST00000614270 90 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC103858.2-201ENST00000621471 543 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AC009268.2-201ENST00000621925 457 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 AL159972.1-201ENST00000625150 448 ntBASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CDK5RAP3Q96JB5 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 SPRR2C-201ENST00000290702 219 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 SNORA51.2-201ENST00000364595 132 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-1181P-201ENST00000384191 106 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC019097.1-201ENST00000424783 735 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC233728.2-201ENST00000425348 757 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 RPL31P35-201ENST00000431058 377 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC104850.1-201ENST00000435940 476 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 FTH1P1-201ENST00000437933 532 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 MTATP6P13-201ENST00000438531 667 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 RAC1P7-201ENST00000445367 377 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC010285.1-201ENST00000470580 392 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC139783.2-201ENST00000504847 1145 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC010587.1-201ENST00000505809 469 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC026726.1-201ENST00000512859 601 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 SNORA31.20-201ENST00000517111 133 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 RNU6-1073P-201ENST00000517182 106 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 MIR2116-201ENST00000517221 80 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 MTND4LP26-201ENST00000518144 282 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC120057.2-201ENST00000571520 271 ntBASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK5RAP3Q96JB5 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms