Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 AP000547.3-204ENST00000588548 2523 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 RNU6-288P-201ENST00000363690 104 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 Y_RNA.286-201ENST00000364813 102 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 SNORD63-201ENST00000384262 68 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 MIR578-201ENST00000384828 96 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 SNORD78.2-201ENST00000391076 69 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 RNU6-607P-201ENST00000411283 108 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 TMSB10P2-201ENST00000416049 131 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 AC234781.4-201ENST00000419384 244 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 AL389915.2-201ENST00000454576 441 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 RN7SL165P-201ENST00000477476 291 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 RPL32P33-201ENST00000487023 394 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 RN7SL591P-201ENST00000496150 292 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 SNRPCP2-201ENST00000504370 475 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 CASP1P1-201ENST00000526345 212 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 AC009318.2-201ENST00000610917 651 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 AC241377.1-201ENST00000619797 406 ntBASIC6.25□□□□□ -1.41
LRCH3Q96II8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
LRCH3Q96II8 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.25□□□□□ -1.41
LRCH3Q96II8 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 AL445487.1-201ENST00000415694 1580 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 AL391516.1-201ENST00000554380 2449 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 AC005225.5-201ENST00000623547 2225 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 RNA5SP391-201ENST00000363456 119 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 RNA5SP479-201ENST00000364858 117 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 RNA5SP251-201ENST00000410614 137 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 AC116036.1-201ENST00000412199 367 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 RPS21P8-201ENST00000413365 247 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 H3F3BP1-201ENST00000440551 403 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 AL450023.1-201ENST00000450868 751 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 RNU6-1037P-201ENST00000459571 107 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 AC010409.1-201ENST00000487382 476 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 SNORD116-25-201ENST00000516517 92 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 MIR15A-201ENST00000607334 83 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 AC024255.1-201ENST00000614376 102 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 AC105235.1-201ENST00000623208 1816 ntBASIC6.24□□□□□ -1.41
LRCH3Q96II8 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.24□□□□□ -1.41
LRCH3Q96II8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LRCH3Q96II8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LRCH3Q96II8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 BTBD10P1-201ENST00000549824 1352 ntBASIC6.23□□□□□ -1.41
LRCH3Q96II8 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LRCH3Q96II8 SNORA25.1-201ENST00000362326 128 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms