Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLIP3Q96DZ5 AC009643.2-201ENST00000603543 1448 ntBASIC4.54□□□□□ -1.68
CLIP3Q96DZ5 AL136164.3-201ENST00000624429 3978 ntBASIC4.54□□□□□ -1.68
CLIP3Q96DZ5 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.54□□□□□ -1.68
CLIP3Q96DZ5 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 SNORA7.2-201ENST00000364446 145 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RNU6-637P-201ENST00000384050 107 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RNU6-1181P-201ENST00000384191 106 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RNU1-82P-201ENST00000390851 165 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RNA5SP332-201ENST00000391063 115 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 MRPL42P2-201ENST00000403169 426 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AL122016.1-201ENST00000403365 367 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RNU6-516P-201ENST00000411381 104 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 TOMM22P1-201ENST00000418578 312 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RPS6P12-201ENST00000432491 726 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RPL35AP22-201ENST00000436855 335 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 FTH1P1-201ENST00000437933 532 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 HMGB3P12-201ENST00000438745 556 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 MRPL50P4-201ENST00000446432 475 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RN7SL517P-201ENST00000462240 305 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 SCARNA22-201ENST00000503991 125 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 HMGB1P22-201ENST00000505315 124 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 HMGN1P28-201ENST00000521340 364 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AP005597.4-201ENST00000526762 229 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AP003181.2-201ENST00000528941 181 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC243972.3-201ENST00000539655 198 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC055876.1-202ENST00000567053 138 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 COX6CP3-201ENST00000580869 223 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 BNIP3P22-201ENST00000593399 556 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RPL26P30-202ENST00000602923 645 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC004908.2-201ENST00000609090 574 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 BX005214.3-202ENST00000619809 325 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC015967.1-201ENST00000619893 476 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AL353748.2-201ENST00000622148 471 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AL138713.1-201ENST00000624026 2130 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 AC138649.5-201ENST00000637456 137 ntBASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLIP3Q96DZ5 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.69
CLIP3Q96DZ5 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RN7SKP44-201ENST00000363602 316 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 Y_RNA.157-201ENST00000363638 102 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RNU1-32P-201ENST00000363937 159 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 SNORA63C-201ENST00000364578 129 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 Y_RNA.381-201ENST00000365666 102 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 MIR19A-201ENST00000384878 82 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RNU2-43P-201ENST00000410306 190 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RNU2-8P-201ENST00000410727 190 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AL591848.1-201ENST00000413092 322 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RPL21P112-201ENST00000434403 463 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RPL35AP21-201ENST00000437667 333 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RPS24P6-201ENST00000452670 400 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AL445433.1-201ENST00000457507 257 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 snoU13.24-201ENST00000458998 104 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 snoU13.1-201ENST00000459157 104 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RPL23AP2-201ENST00000471227 466 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AC083798.1-201ENST00000472671 131 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 RN7SL860P-201ENST00000473738 223 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AC026801.2-201ENST00000515352 425 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 TRMT10BP1-201ENST00000519377 943 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 OR5B19P-201ENST00000531766 928 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AC005868.1-201ENST00000536421 331 ntBASIC4.52□□□□□ -1.69
CLIP3Q96DZ5 AL133271.1-201ENST00000538229 291 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms