Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 USP9YP15-201ENST00000442391 422 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
TTC28Q96AY4 XKRYP5-201ENST00000449659 483 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 AC239798.3-201ENST00000454459 408 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 SUMO2P6-201ENST00000505273 288 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.69□□□□□ -2.14
TTC28Q96AY4 AC008121.3-201ENST00000618726 433 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TTC28Q96AY4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 AC009969.1-201ENST00000438726 172 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 AC005297.2-201ENST00000450430 606 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 RPS3AP23-202ENST00000574601 686 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.69□□□□□ -2.14
TTC28Q96AY4 AC091895.1-201ENST00000624494 256 ntBASIC1.69□□□□□ -2.14
TTC28Q96AY4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.69□□□□□ -2.14
TTC28Q96AY4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
TTC28Q96AY4 AC013470.3-201ENST00000420252 1194 ntBASIC1.68□□□□□ -2.14
TTC28Q96AY4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.68□□□□□ -2.14
TTC28Q96AY4 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.68□□□□□ -2.14
TTC28Q96AY4 AC090751.1-201ENST00000566966 267 ntBASIC1.68□□□□□ -2.14
TTC28Q96AY4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.68□□□□□ -2.14
TTC28Q96AY4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.68□□□□□ -2.14
TTC28Q96AY4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
TTC28Q96AY4 Y_RNA.115-201ENST00000363272 98 ntBASIC1.68□□□□□ -2.14
TTC28Q96AY4 RNU6-60P-201ENST00000364792 103 ntBASIC1.68□□□□□ -2.14
TTC28Q96AY4 RPL36AP6-201ENST00000435770 321 ntBASIC1.68□□□□□ -2.14
TTC28Q96AY4 COX6CP14-201ENST00000469580 174 ntBASIC1.68□□□□□ -2.14
TTC28Q96AY4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TTC28Q96AY4 AC021146.7-201ENST00000509604 775 ntBASIC1.68□□□□□ -2.14
TTC28Q96AY4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.68□□□□□ -2.14
TTC28Q96AY4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.68□□□□□ -2.14
TTC28Q96AY4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
TTC28Q96AY4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.68□□□□□ -2.14
TTC28Q96AY4 AC095050.2-201ENST00000510748 1458 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
TTC28Q96AY4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 MIR1323-201ENST00000408090 73 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 RPS6P15-201ENST00000431996 751 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.67□□□□□ -2.14
TTC28Q96AY4 AC109464.2-201ENST00000510242 943 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 RNA5SP76-201ENST00000516277 87 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 AL450489.1-201ENST00000612071 468 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 AC011472.4-201ENST00000615848 491 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TTC28Q96AY4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TTC28Q96AY4 Y_RNA.390-201ENST00000383932 102 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 MIR193B-201ENST00000384907 83 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 RPL23AP29-201ENST00000397284 453 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.67□□□□□ -2.14
TTC28Q96AY4 EBAG9P1-201ENST00000418955 543 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 AC234781.2-201ENST00000426370 994 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 MTND4LP12-201ENST00000448237 295 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 RFC5P1-201ENST00000454419 874 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.67□□□□□ -2.14
TTC28Q96AY4 RNA5SP121-201ENST00000516537 101 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 AC068135.2-201ENST00000569293 1028 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 MIR1273G-201ENST00000577677 100 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 MIR5000-201ENST00000577717 103 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TTC28Q96AY4 AC023043.3-201ENST00000593113 385 ntBASIC1.67□□□□□ -2.14
TTC28Q96AY4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TTC28Q96AY4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TTC28Q96AY4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.66□□□□□ -2.14
TTC28Q96AY4 SETP8-201ENST00000435341 628 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 RPL7P5-201ENST00000471472 736 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 AC079804.2-201ENST00000490376 200 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 RPS27AP18-201ENST00000515536 459 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.66□□□□□ -2.14
TTC28Q96AY4 AP000907.2-201ENST00000530827 353 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 AC107918.3-201ENST00000533272 382 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 RN7SL793P-201ENST00000583259 296 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 AC068944.2-201ENST00000610373 403 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 AC012640.5-201ENST00000623897 319 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.66□□□□□ -2.14
TTC28Q96AY4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
TTC28Q96AY4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
TTC28Q96AY4 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
TTC28Q96AY4 MTCO3P31-201ENST00000405526 789 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.66□□□□□ -2.14
TTC28Q96AY4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.66□□□□□ -2.14
TTC28Q96AY4 RPL30P3-201ENST00000424262 333 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 AL691517.1-201ENST00000440833 1235 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 MTCO1P48-201ENST00000448024 1096 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 HMGB3P8-201ENST00000449709 577 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 KATNBL1P4-201ENST00000503545 918 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 ZNF209P-201ENST00000593450 2304 ntBASIC1.66□□□□□ -2.14
TTC28Q96AY4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
TTC28Q96AY4 RNU4-13P-201ENST00000364019 141 ntBASIC1.65□□□□□ -2.14
TTC28Q96AY4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.65□□□□□ -2.14
TTC28Q96AY4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.65□□□□□ -2.14
TTC28Q96AY4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.14
TTC28Q96AY4 RPS6P12-201ENST00000432491 726 ntBASIC1.65□□□□□ -2.14
TTC28Q96AY4 XKRY2-201ENST00000442362 1093 ntBASIC1.65□□□□□ -2.14
TTC28Q96AY4 RPL23AP14-201ENST00000468281 468 ntBASIC1.65□□□□□ -2.14
TTC28Q96AY4 CR383656.8-201ENST00000549046 145 ntBASIC1.65□□□□□ -2.14
TTC28Q96AY4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.65□□□□□ -2.14
TTC28Q96AY4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.65□□□□□ -2.14
TTC28Q96AY4 AC025263.3-201ENST00000622965 1396 ntBASIC1.65□□□□□ -2.14
TTC28Q96AY4 AC244517.1-201ENST00000606030 2086 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms