Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RN7SKP159-201ENST00000410657 292 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AIMP1P1-201ENST00000418670 937 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 MTND1P28-201ENST00000435623 950 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC091862.1-201ENST00000438016 1100 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AL357552.1-201ENST00000445254 415 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 RPS4XP2-201ENST00000458402 793 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AL133162.1-201ENST00000463228 453 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 RPS4XP10-201ENST00000465034 731 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 RN7SL594P-201ENST00000470590 287 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC021205.2-201ENST00000480069 347 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 UBE2CP3-201ENST00000502715 450 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 MTND3P5-201ENST00000512798 333 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 Y_RNA.655-201ENST00000515919 96 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AL845331.3-202ENST00000562856 261 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC239868.4-201ENST00000608318 671 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC005344.1-201ENST00000613391 459 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 AC009509.4-201ENST00000619202 509 ntBASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SLC44A1Q8WWI5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 RNU6-263P-201ENST00000363811 107 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 RNU5E-5P-201ENST00000365379 116 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AL356421.1-201ENST00000403255 413 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC006366.1-201ENST00000422002 759 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AP000907.1-201ENST00000428428 510 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 BX679664.1-201ENST00000434429 253 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 MTCO1P19-201ENST00000443487 500 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AP004289.2-201ENST00000444413 1457 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 RPL7P36-201ENST00000444633 681 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AP000936.2-201ENST00000447151 681 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 BTF3P5-201ENST00000457252 467 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 RNU6-1003P-201ENST00000517099 105 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AP002963.1-201ENST00000530590 184 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 HSPE1P5-201ENST00000561489 272 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC138915.3-201ENST00000562908 1389 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 MIR5697-201ENST00000578045 78 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 MIR5685-201ENST00000579080 79 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC103987.3-201ENST00000582071 292 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC090616.5-202ENST00000582111 297 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC010928.3-201ENST00000587712 541 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC119751.7-201ENST00000600494 245 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 HULC.1-201ENST00000612720 240 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 MIR8058-201ENST00000615737 89 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AL354798.1-201ENST00000622505 329 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 AC092656.1-203ENST00000624134 423 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.57□□□□□ -1.84
SLC44A1Q8WWI5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms