Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC009902.3-201ENST00000606235 2172 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 AC097714.1-201ENST00000511272 1647 ntBASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SHKBP1Q8TBC3 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-179P-201ENST00000363350 107 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 RNU1-32P-201ENST00000363937 159 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.222-201ENST00000364264 102 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.234-201ENST00000364409 97 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.424-201ENST00000384063 103 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 Y_RNA.477-201ENST00000384352 108 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 RNU6-441P-201ENST00000384545 106 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 MIR1302-6-201ENST00000408466 90 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 MIR1252-201ENST00000408861 65 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AC119751.6-201ENST00000416712 186 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AL137014.1-201ENST00000420490 1226 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AL590135.1-201ENST00000422215 156 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 RPS17P8-201ENST00000434525 335 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AURKAPS2-201ENST00000454983 333 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AC021146.3-201ENST00000511911 260 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 RNA5SP392-201ENST00000516905 112 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 IGKV1-32-201ENST00000519290 311 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 RAB9BP1-201ENST00000519581 626 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AP001880.2-201ENST00000538233 448 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AC022884.2-201ENST00000578535 580 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AL713866.2-201ENST00000603579 219 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 SMG1P7-201ENST00000565246 2704 ntBASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SHKBP1Q8TBC3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC006484.1-201ENST00000435086 1884 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC000374.1-201ENST00000434698 1745 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 SNORD115-7-201ENST00000365306 82 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 UBBP2-201ENST00000376781 231 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 MIR19A-201ENST00000384878 82 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 PRRC2CP1-201ENST00000404428 159 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 MTCO3P19-201ENST00000415864 321 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC243428.1-201ENST00000421099 264 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AL590233.1-201ENST00000430017 456 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC010733.1-201ENST00000451515 401 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AL353752.1-201ENST00000454946 260 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 RPL23AP56-201ENST00000460778 453 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 FO393415.2-201ENST00000480085 343 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 RN7SL809P-201ENST00000482040 297 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC114801.2-201ENST00000503825 781 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC108471.1-201ENST00000513977 287 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AP003385.6-201ENST00000531603 374 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC022080.3-201ENST00000544433 482 ntBASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.17□□□□□ -1.58
SHKBP1Q8TBC3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms