Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC004908.2-201ENST00000609090 574 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 SNX18P1Y-201ENST00000616231 511 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 MIR8069-1-201ENST00000616627 86 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 MIR6853-201ENST00000619642 74 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 MIR8069-2-201ENST00000621412 86 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AC091953.3-201ENST00000623220 236 ntBASIC4.1□□□□□ -1.75
CPEB3Q8NE35 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.1□□□□□ -1.75
CPEB3Q8NE35 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RN7SKP115-201ENST00000363177 317 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RNU1-83P-201ENST00000363426 164 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 SNORA62.1-201ENST00000364287 154 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RNU6-1279P-201ENST00000383917 103 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 Y_RNA.387-201ENST00000383918 102 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AL583835.1-201ENST00000399570 407 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AL080315.1-201ENST00000406055 466 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RNU4-26P-201ENST00000410270 107 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AL360081.1-201ENST00000428299 555 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AL049745.1-201ENST00000433953 286 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC236972.2-201ENST00000434979 310 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 NDUFS5P3-201ENST00000450668 321 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 PPP1R2P5-201ENST00000457256 603 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 MTND4P17-201ENST00000470444 350 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RPS15AP36-201ENST00000492022 382 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC116562.3-201ENST00000506136 177 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 MTCO3P44-201ENST00000510977 541 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC017037.2-201ENST00000513850 890 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RNU6-327P-201ENST00000516270 127 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RNU6-798P-201ENST00000516912 103 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 TRMT10BP1-201ENST00000519377 943 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 IGLVIV-53-201ENST00000520107 367 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 HMGB1P41-201ENST00000520234 440 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RPL7P20-201ENST00000520308 745 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC090281.1-201ENST00000523019 276 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC068587.5-201ENST00000528506 175 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 OR5B10P-201ENST00000532869 642 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 RN7SL652P-201ENST00000577769 300 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 BNIP3P22-201ENST00000593399 556 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC040168.1-201ENST00000623594 991 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AC091925.2-201ENST00000625059 256 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.09□□□□□ -1.75
CPEB3Q8NE35 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.09□□□□□ -1.75
CPEB3Q8NE35 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CPEB3Q8NE35 AC011266.1-201ENST00000624119 3569 ntBASIC4.09□□□□□ -1.76
CPEB3Q8NE35 NXPH1-205ENST00000602349 1953 ntBASIC4.09□□□□□ -1.76
CPEB3Q8NE35 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CPEB3Q8NE35 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CPEB3Q8NE35 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AC073343.1-201ENST00000328239 651 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AL590240.1-201ENST00000334118 313 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 RNU4-66P-201ENST00000365199 138 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 RN7SKP267-201ENST00000410381 285 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 HMGN1P24-201ENST00000412282 298 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 RPL7L1P10-201ENST00000427790 463 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 Z95327.1-201ENST00000446082 482 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 H2AFZP5-201ENST00000446960 382 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AL118520.1-201ENST00000450770 291 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 MTND1P9-201ENST00000453775 944 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 RNU7-59P-201ENST00000459101 61 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AC087385.1-201ENST00000475062 312 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 LARP1BP1-201ENST00000506036 1359 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AC091885.1-201ENST00000506658 268 ntBASIC4.08□□□□□ -1.76
CPEB3Q8NE35 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.08□□□□□ -1.76
CPEB3Q8NE35 RNU6-27P-201ENST00000516146 107 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms