Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC008837.2-201ENST00000513076 418 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 FABP5P12-201ENST00000515543 389 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 SNORA70.16-201ENST00000516390 95 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 PDCL2P2-201ENST00000533651 189 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 RPL21P12-201ENST00000559810 515 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC087465.1-201ENST00000560574 245 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC106791.2-201ENST00000604680 391 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC008121.2-201ENST00000614647 523 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 AC231657.1-201ENST00000624313 397 ntBASIC3.36□□□□□ -1.87
RTL3Q8N8U3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RTL3Q8N8U3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 RPL23AP57-201ENST00000332361 466 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 FAM133CP-201ENST00000332869 704 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 DEFB108F-201ENST00000344638 222 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 Y_RNA.192-201ENST00000363977 102 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 Y_RNA.408-201ENST00000383987 102 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 TAF9BP1-201ENST00000396646 746 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 RNA5SP80-201ENST00000410475 111 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 RNA5SP38-201ENST00000410750 119 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC063979.1-201ENST00000415539 377 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 TIMM9P2-201ENST00000419324 266 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AL158156.1-201ENST00000422509 473 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 USP9YP11-201ENST00000427537 717 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 RPL21P40-201ENST00000428586 483 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 MTND1P32-201ENST00000433043 938 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 THAP5P1-201ENST00000439089 262 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 HMGB3P11-201ENST00000440127 604 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 MTATP6P26-201ENST00000445926 662 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 Z99127.3-201ENST00000448158 395 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC140076.1-201ENST00000449897 361 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 RN7SL601P-201ENST00000471221 293 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC110794.1-201ENST00000505816 425 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AL359273.1-201ENST00000510918 627 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC074250.1-201ENST00000511117 192 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 DEFB108D-201ENST00000527787 222 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 ZNF321P-202ENST00000550843 495 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AL354943.1-201ENST00000572103 781 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC024220.1-201ENST00000603675 484 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC097478.2-201ENST00000610572 514 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC022079.1-201ENST00000621546 602 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC079416.3-201ENST00000624479 549 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC017037.3-201ENST00000625016 472 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 AC009812.4-201ENST00000569134 1805 ntBASIC3.35□□□□□ -1.87
RTL3Q8N8U3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RTL3Q8N8U3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC092326.2-201ENST00000624772 1561 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 RNU1-75P-201ENST00000347264 129 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 RNU6-157P-201ENST00000383957 107 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 Y_RNA.465-201ENST00000384293 102 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AL357075.1-201ENST00000404107 726 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 RPL7P49-201ENST00000471402 708 ntBASIC3.34□□□□□ -1.87
RTL3Q8N8U3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.34□□□□□ -1.87
RTL3Q8N8U3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms