Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RN7SKP96-201ENST00000516948 297 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 AL391840.1-201ENST00000571144 367 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 MIR4513-201ENST00000581077 86 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC233702.9-201ENST00000581528 203 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC078795.3-201ENST00000602913 472 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 BCRP9-201ENST00000605312 388 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AP001521.1-201ENST00000609150 300 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC093788.1-201ENST00000609356 927 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC231657.1-201ENST00000624313 397 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
SYNE4Q8N205 AC009229.4-201ENST00000623854 1947 ntBASIC4.68□□□□□ -1.66
SYNE4Q8N205 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE4Q8N205 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 LINC01109-201ENST00000603837 3081 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC107081.3-201ENST00000612715 2034 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE4Q8N205 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 SNORD9-201ENST00000362566 104 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 RNU4-73P-201ENST00000363164 141 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 Y_RNA.263-201ENST00000364659 114 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 Y_RNA.529-201ENST00000384586 119 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 RN7SKP247-201ENST00000411094 308 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE4Q8N205 USP9YP27-201ENST00000418455 438 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 SDCBPP1-201ENST00000440192 890 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 PMCHL2-203ENST00000457791 237 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 SNORA70.18-201ENST00000516696 98 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC008011.1-201ENST00000545989 227 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 HMGN1P30-201ENST00000589286 268 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 AL391646.1-201ENST00000603860 190 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AC064836.2-201ENST00000609491 462 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 MIR3662-201ENST00000637030 95 ntBASIC4.67□□□□□ -1.66
SYNE4Q8N205 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.67□□□□□ -1.66
SYNE4Q8N205 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE4Q8N205 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SYNE4Q8N205 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AL157700.1-201ENST00000561973 1432 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 OR4G11P-202ENST00000642116 1414 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 RNU6-1293P-201ENST00000384077 107 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 MIR506-201ENST00000384998 124 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 MIR513A2-201ENST00000385249 127 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 RPL31P1-201ENST00000398116 372 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AL121972.1-201ENST00000402023 252 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 RNU6-603P-201ENST00000411403 107 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC096664.2-201ENST00000411843 406 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 DBIP2-201ENST00000419076 262 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC083875.1-201ENST00000419509 405 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 SDCBPP3-201ENST00000419629 891 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC008850.1-201ENST00000427546 362 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC073063.1-201ENST00000434352 607 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC104850.1-201ENST00000435940 476 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 Z82190.1-201ENST00000454534 490 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SYNE4Q8N205 AC021678.1-201ENST00000505195 936 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 HMGB1P29-201ENST00000505659 499 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 FTH1P9-201ENST00000513251 355 ntBASIC4.66□□□□□ -1.66
SYNE4Q8N205 MTND5P4-201ENST00000514978 288 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms