Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RPL7P36-201ENST00000444633 681 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 HMGN2P21-201ENST00000447764 270 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 HMGB1P15-201ENST00000453854 435 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 DNAJC19P1-201ENST00000455312 319 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 RPL23AP62-201ENST00000463396 453 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 SNRPGP3-201ENST00000469405 227 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC074250.1-201ENST00000511117 192 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 PTGES3P3-201ENST00000511479 482 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 SNORA70.24-201ENST00000517233 118 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 OR6C73P-201ENST00000546432 358 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC005771.1-201ENST00000585581 349 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AL669831.4-202ENST00000590817 238 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AL365503.1-201ENST00000605247 905 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AP000254.1-201ENST00000609934 520 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 AC048347.1-201ENST00000624621 427 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 CR381572.1-201ENST00000625098 102 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 CRYM-AS1-204ENST00000637983 556 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.05□□□□□ -1.76
VPS52Q8N1B4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VPS52Q8N1B4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RNA5SP258-201ENST00000362750 119 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RNU6-989P-201ENST00000362756 107 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 Y_RNA.234-201ENST00000364409 97 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 MIR218-2-201ENST00000385006 110 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RPL7P60-201ENST00000397636 735 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 HSPE1P26-201ENST00000405341 275 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RNU2-16P-201ENST00000410712 136 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 MTCO3P41-201ENST00000414801 328 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC245052.5-201ENST00000416320 649 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC092641.1-201ENST00000440229 772 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RPS3AP46-201ENST00000448352 682 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 snoU109.4-201ENST00000458953 143 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 snoU13.3-201ENST00000459441 104 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AP001025.2-201ENST00000490908 477 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RPL7P24-201ENST00000493052 752 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC023424.2-201ENST00000493479 777 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC034222.1-201ENST00000494052 532 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RNU6-27P-201ENST00000516146 107 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RN7SKP116-201ENST00000516902 319 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RNU6-1003P-201ENST00000517099 105 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RNU4-60P-201ENST00000517239 135 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AP002748.2-201ENST00000528671 348 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AP003385.6-201ENST00000531603 374 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC024224.1-201ENST00000538284 609 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC090615.1-201ENST00000577519 154 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 RNU1-30P-201ENST00000606575 163 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC104073.3-201ENST00000610942 955 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC091925.2-201ENST00000625059 256 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 CCT4P2-201ENST00000233836 1548 ntBASIC4.04□□□□□ -1.76
VPS52Q8N1B4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS52Q8N1B4 AC006504.1-201ENST00000562493 3666 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 GABPAP-201ENST00000419271 1356 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 HSPA8P1-201ENST00000425843 1833 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC073346.2-201ENST00000624724 2058 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 RNU6-359P-201ENST00000365466 108 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 Y_RNA.505-201ENST00000384489 102 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 RNU6-821P-201ENST00000390995 107 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 SNORD115.1-201ENST00000391109 76 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 HMGN2P8-201ENST00000391458 268 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 RHEBP3-201ENST00000411920 351 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AL159169.1-201ENST00000421119 127 ntBASIC4.03□□□□□ -1.76
VPS52Q8N1B4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms