Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.89□□□□□ -1.95
C9orf40Q8IXQ3 DDX43P2-201ENST00000604753 1354 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC021755.1-201ENST00000559747 1447 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 OR5H2-201ENST00000355273 945 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 SNORD56.3-201ENST00000363507 71 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 SNORD67-201ENST00000390833 111 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 HSPE1P26-201ENST00000405341 275 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 RNU2-47P-201ENST00000410649 186 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 SDCBPP1-201ENST00000440192 890 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AL671855.1-201ENST00000446875 1203 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC016696.1-201ENST00000446949 318 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 EEF1E1P1-201ENST00000446998 430 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 RPL7P52-201ENST00000449200 742 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 HMGB1P15-201ENST00000453854 435 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 Z82190.1-201ENST00000454534 490 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 RPL31P50-201ENST00000471002 296 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 POU5F1P7-201ENST00000508759 541 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC112673.1-201ENST00000513168 575 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 RNA5SP217-201ENST00000515959 91 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 RNU6-1095P-201ENST00000516148 108 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 SNORA64.4-201ENST00000516632 81 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC023538.1-201ENST00000534576 736 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC018630.1-201ENST00000541376 925 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 OR4T1P-201ENST00000554933 911 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 MIR3690-201ENST00000580266 75 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 BBIP1P1-201ENST00000602999 279 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AL591516.1-201ENST00000611326 274 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC021755.4-201ENST00000616620 456 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AL136981.2-201ENST00000617319 734 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AL357080.1-201ENST00000617394 239 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AL445264.1-201ENST00000621719 171 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AL356585.4-201ENST00000623078 1229 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 AC008264.2-201ENST00000610193 3731 ntBASIC2.88□□□□□ -1.95
C9orf40Q8IXQ3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 RNU6-1214P-201ENST00000363650 109 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 RNU6-1074P-201ENST00000383995 104 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 SNORA54-201ENST00000384281 123 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 SNORD15B-201ENST00000384714 146 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 SNORA48.8-201ENST00000391324 134 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AL356131.1-201ENST00000405826 414 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 MTND5P14-201ENST00000441481 1267 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AL353691.1-201ENST00000451332 387 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 snoU13.4-201ENST00000458916 104 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 VN1R17P-201ENST00000472048 1090 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 MTND2P14-201ENST00000482139 351 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 RN7SL283P-201ENST00000489055 303 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 SNORD84-203ENST00000584275 78 ntBASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf40Q8IXQ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms