Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 SNORA44-201ENST00000384584 132 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 RN7SKP220-201ENST00000410611 288 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 MTCYBP38-201ENST00000417160 1123 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AL953862.1-201ENST00000423016 168 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC019178.2-201ENST00000423595 505 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 NANOGNBP1-201ENST00000448444 480 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 RPL23AP35-201ENST00000451906 501 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AL109741.2-201ENST00000455561 343 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 RNU7-136P-201ENST00000458819 69 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 MEMO1P3-201ENST00000459811 302 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 RPL21P104-201ENST00000464143 478 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 FAM172BP-201ENST00000487497 1089 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC009812.2-201ENST00000517657 457 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC022861.1-201ENST00000522981 663 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 HIGD1AP10-201ENST00000527837 282 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 ELOCP32-201ENST00000548625 324 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AL451007.1-201ENST00000595491 289 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AL139344.1-201ENST00000605228 195 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC135507.2-201ENST00000612443 309 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC079228.1-201ENST00000624774 1049 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 AC091925.2-201ENST00000625059 256 ntBASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC60Q8IWA6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AL022578.1-201ENST00000439330 1433 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 RNA5SP258-201ENST00000362750 119 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 RNU6-1249P-201ENST00000363237 111 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 RNU6-629P-201ENST00000384061 103 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AL031679.1-201ENST00000400616 525 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AL583834.1-201ENST00000406943 343 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 RPL7P30-201ENST00000420888 709 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 HSPE1P28-201ENST00000443139 211 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 HMGN2P16-201ENST00000456802 261 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 RPS4XP22-201ENST00000480755 780 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC104685.1-201ENST00000502445 371 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC147055.4-201ENST00000504399 745 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC006390.1-201ENST00000508068 283 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC010625.1-201ENST00000511296 403 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 MTCYBP43-201ENST00000513621 740 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC109635.4-202ENST00000531666 412 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AP002404.1-201ENST00000532005 451 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 EIF4BP1-201ENST00000554881 351 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC090888.2-201ENST00000559765 1144 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC008507.1-201ENST00000587506 734 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC080013.4-201ENST00000607624 649 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC091304.6-201ENST00000619761 202 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 AC004009.2-201ENST00000623016 728 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.44□□□□□ -1.86
CCDC60Q8IWA6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 SGO1P2-201ENST00000429458 1589 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 MTND4P34-201ENST00000572715 1371 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AP000526.1-201ENST00000603308 1388 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 RPL7P26-201ENST00000333817 754 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 AC073325.2-201ENST00000339545 159 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 OR5H2-201ENST00000355273 945 ntBASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC60Q8IWA6 RNU6-931P-201ENST00000363850 107 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms