Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SNORA71.1-201ENST00000364523 117 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 Y_RNA.408-201ENST00000383987 102 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 RNU6-882P-201ENST00000391025 103 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 MRPS36P1-201ENST00000421291 307 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 HMGN2P30-201ENST00000423237 256 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC007742.1-201ENST00000425789 329 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AL590233.1-201ENST00000430017 456 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 ELOCP26-201ENST00000436067 329 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 RAC1P7-201ENST00000445367 377 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC008571.1-201ENST00000467232 300 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 RPL30P14-201ENST00000482744 348 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC023424.2-201ENST00000493479 777 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 OR2A20P-203ENST00000498397 1268 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 RNU6-276P-201ENST00000516114 96 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AL133271.1-201ENST00000538229 291 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 CR383656.7-201ENST00000548164 174 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC012443.1-201ENST00000605605 231 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AC004696.1-201ENST00000614345 607 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 OR8B1P-202ENST00000641132 1178 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.81□□□□□ -1.96
NUDCD3Q8IVD9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 CUL1P1-201ENST00000509510 2425 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 CDR1-202ENST00000625883 1485 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 RNU4-51P-201ENST00000364206 140 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 MIR135A2-201ENST00000384854 100 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 MIR493-201ENST00000385254 89 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 SNORA40.2-201ENST00000390847 128 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 RPS4XP3-201ENST00000398541 413 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 OR6K5P-201ENST00000447050 945 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AL590664.1-201ENST00000448065 339 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 RPL37P4-201ENST00000448908 268 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 TRGVB-201ENST00000453257 471 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AP001992.1-205ENST00000462248 379 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AL049829.1-201ENST00000465411 156 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 RPL27AP5-201ENST00000469428 449 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AC003982.1-202ENST00000469928 248 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 RN7SL601P-201ENST00000471221 293 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AC104982.1-201ENST00000478775 574 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AC108734.3-201ENST00000481241 1165 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 DSTNP2-201ENST00000504533 515 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 HSPE1P20-201ENST00000538133 289 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 NBEAP1-201ENST00000554452 979 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 HSPE1P3-201ENST00000559254 309 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AADACP1-206ENST00000561502 1193 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AL031176.1-201ENST00000604554 466 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AL133507.1-201ENST00000605269 557 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 MIR92B-201ENST00000607575 96 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 AC024257.5-201ENST00000612739 531 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 MIR7975-201ENST00000619350 68 ntBASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.8□□□□□ -1.96
NUDCD3Q8IVD9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 Z82195.2-201ENST00000612348 18351 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC090740.1-201ENST00000623193 2262 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AL513185.3-201ENST00000433335 1300 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 SNORA63.1-201ENST00000362493 131 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 DHFRP6-201ENST00000401776 268 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 Z75741.2-201ENST00000417272 1167 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 RPL36AP6-201ENST00000435770 321 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AL353691.1-201ENST00000451332 387 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 RPL7P49-201ENST00000471402 708 ntBASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.79□□□□□ -1.96
NUDCD3Q8IVD9 AC090453.1-201ENST00000495560 436 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms