Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC104164.2-201ENST00000496953 495 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 TXNP6-201ENST00000510190 310 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 SNORD27.1-201ENST00000516319 72 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 RNA5SP49-201ENST00000516450 115 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 RNA5SP519-201ENST00000516480 119 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 RNA5SP337-201ENST00000517007 109 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 ZNF705CP-201ENST00000530515 889 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC006064.5-201ENST00000541782 248 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC098848.2-201ENST00000588023 330 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AL022345.1-201ENST00000607292 135 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC114781.5-201ENST00000615297 108 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC009318.4-201ENST00000620496 486 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AP000843.1-201ENST00000624880 701 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC114546.3-201ENST00000623582 1734 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VRK3Q8IV63 MFSD8-242ENST00000641690 4199 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 AC093775.1-201ENST00000624154 1868 ntBASIC4.2□□□□□ -1.74
VRK3Q8IV63 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.2□□□□□ -1.74
VRK3Q8IV63 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC107081.3-201ENST00000612715 2034 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VRK3Q8IV63 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AL161781.1-201ENST00000354277 403 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 RNU6-996P-201ENST00000365438 107 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 Y_RNA.395-201ENST00000383945 109 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 Y_RNA.615-201ENST00000410769 117 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 RN7SKP216-201ENST00000411050 312 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC011933.1-201ENST00000413334 321 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 CHIAP3-201ENST00000423668 1133 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC006548.1-201ENST00000427470 102 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 Z82205.1-201ENST00000428456 297 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AP000936.3-201ENST00000438127 255 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 HSPE1P28-201ENST00000443139 211 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 EEF1A1P1-201ENST00000447052 739 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC009220.1-201ENST00000451614 275 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC116533.1-201ENST00000459748 321 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC007547.1-201ENST00000462177 490 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC005912.1-201ENST00000495392 255 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC108145.1-201ENST00000503770 153 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 HSPD1P15-201ENST00000505573 1122 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC105417.1-201ENST00000514691 285 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 RN7SKP96-201ENST00000516948 297 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 RNU6-410P-201ENST00000517006 107 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VRK3Q8IV63 AL355836.1-201ENST00000555951 870 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC026464.5-201ENST00000562497 722 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AC006116.10-201ENST00000591836 581 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 CR381572.1-201ENST00000625098 102 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VRK3Q8IV63 MAPK10-304ENST00000641341 3984 ntBASIC4.19□□□□□ -1.74
VRK3Q8IV63 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VRK3Q8IV63 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VRK3Q8IV63 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VRK3Q8IV63 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VRK3Q8IV63 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.18□□□□□ -1.74
VRK3Q8IV63 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.18□□□□□ -1.74
VRK3Q8IV63 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.18□□□□□ -1.74
VRK3Q8IV63 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VRK3Q8IV63 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
VRK3Q8IV63 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
VRK3Q8IV63 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VRK3Q8IV63 RNU1-14P-201ENST00000362759 152 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms