Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MIR5096-201ENST00000583713 70 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC067852.3-201ENST00000589177 561 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AC084781.2-201ENST00000615568 161 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 AL445363.3-201ENST00000623080 671 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 MTND4LP32-201ENST00000636111 270 ntBASIC5.4□□□□□ -1.54
NPAS4Q8IUM7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
NPAS4Q8IUM7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NPAS4Q8IUM7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NPAS4Q8IUM7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.4□□□□□ -1.55
NPAS4Q8IUM7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
NPAS4Q8IUM7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NPAS4Q8IUM7 PRO1804-201ENST00000623780 2050 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC121333.1-201ENST00000567488 2709 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 Y_RNA.414-201ENST00000384011 101 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 RNU6-1105P-201ENST00000384774 107 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 SNORA48.4-201ENST00000391089 134 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC113618.1-201ENST00000416747 285 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 BX510359.2-201ENST00000417920 305 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 MTCO1P39-201ENST00000426148 480 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AL591704.1-201ENST00000432574 275 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 TPT1P12-201ENST00000448968 492 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC091180.1-201ENST00000462104 372 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC012339.2-201ENST00000523996 453 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC109635.4-202ENST00000531666 412 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AP001880.2-201ENST00000538233 448 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC080078.3-201ENST00000605407 463 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC011373.1-201ENST00000607270 237 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 U2.17-201ENST00000611454 95 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC004696.1-201ENST00000614345 607 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AC011755.1-201ENST00000623763 2049 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 GVINP1-202ENST00000531871 7271 ntBASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
NPAS4Q8IUM7 MAPK10-338ENST00000641647 3362 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 SNORD113-7-201ENST00000363762 77 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 U3.12-201ENST00000364498 214 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 Y_RNA.445-201ENST00000384168 102 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 SNORA70.10-201ENST00000384515 134 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 MTCO2P27-201ENST00000420740 428 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 SCARNA18-201ENST00000459004 134 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AC010326.1-201ENST00000462726 602 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 RN7SL385P-201ENST00000468873 276 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AC010285.1-201ENST00000470580 392 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AC108860.1-201ENST00000484521 383 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 RBBP4P6-201ENST00000508098 202 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 TTC39CP1-201ENST00000512513 755 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 RN7SKP276-201ENST00000516242 268 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AC136777.2-201ENST00000522979 358 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AL121576.1-201ENST00000556055 276 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 MIR4284-201ENST00000578924 81 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 VN1R107P-201ENST00000601784 209 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AC092747.3-201ENST00000603769 301 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AL080274.1-201ENST00000605565 220 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AL627309.6-201ENST00000606857 840 ntBASIC5.38□□□□□ -1.55
NPAS4Q8IUM7 AL360181.4-201ENST00000621752 134 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms