Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNF138P2-201ENST00000603490 592 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 AL596245.1-201ENST00000618994 362 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 NXPH1-205ENST00000602349 1953 ntBASIC4.72□□□□□ -1.65
ATG4DQ86TL0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG4DQ86TL0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
ATG4DQ86TL0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
ATG4DQ86TL0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
ATG4DQ86TL0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
ATG4DQ86TL0 AC008669.1-201ENST00000565823 2178 ntBASIC4.71□□□□□ -1.65
ATG4DQ86TL0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 Y_RNA.464-201ENST00000384282 110 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 RNU6-493P-201ENST00000391321 108 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 RNU2-71P-201ENST00000411395 189 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC108075.1-201ENST00000424692 529 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 TMSB4XP3-201ENST00000445144 114 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC013470.1-201ENST00000453438 462 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 CYCSP34-201ENST00000458172 304 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC087884.1-201ENST00000469738 328 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 BX284632.1-201ENST00000478218 541 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC026801.1-201ENST00000497178 464 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC096745.1-201ENST00000509945 370 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC093853.1-201ENST00000515689 483 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 RNU6-798P-201ENST00000516912 103 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AP003733.2-201ENST00000529409 171 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 VN1R84P-201ENST00000593697 235 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 RPL23AP92-201ENST00000603609 255 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC126915.2-201ENST00000610957 190 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AC130454.1-201ENST00000622948 401 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG4DQ86TL0 Z95327.2-201ENST00000414579 1873 ntBASIC4.71□□□□□ -1.66
ATG4DQ86TL0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AL450345.1-202ENST00000605741 3881 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 Y_RNA.65-201ENST00000362846 100 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 U8.4-201ENST00000363626 134 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RNU4-42P-201ENST00000364738 142 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RNU1-43P-201ENST00000365052 165 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RNU1-106P-201ENST00000384382 164 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 MIR1182-201ENST00000408363 97 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC016769.2-201ENST00000414815 475 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC108032.1-201ENST00000416706 207 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RPL21P38-201ENST00000418090 167 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 FAR2P4-202ENST00000425399 584 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 MYL8P-204ENST00000431574 518 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AL133396.1-201ENST00000432048 687 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 RPL36AP6-201ENST00000435770 321 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC098831.1-201ENST00000440661 216 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC007967.1-201ENST00000455422 1159 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC245028.2-201ENST00000458673 253 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC006967.1-201ENST00000467608 589 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 ENPP7P11-201ENST00000505915 627 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AL359219.2-201ENST00000555184 348 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AC006349.1-201ENST00000555526 235 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AL121576.1-201ENST00000556055 276 ntBASIC4.7□□□□□ -1.66
ATG4DQ86TL0 AL353662.3-201ENST00000625131 237 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms