Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 RPS3AP4-201ENST00000555161 764 ntBASIC2.41□□□□□ -2.02
USP54Q70EL1 ZNF192P1-203ENST00000565888 810 ntBASIC2.41□□□□□ -2.02
USP54Q70EL1 AC092159.4-201ENST00000624944 550 ntBASIC2.41□□□□□ -2.02
USP54Q70EL1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
USP54Q70EL1 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USP54Q70EL1 AC240504.1-201ENST00000395709 845 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 RNU2-20P-201ENST00000410425 191 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 AC013404.1-201ENST00000413068 249 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 AC027124.2-201ENST00000428249 105 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 RPL23AP58-201ENST00000440453 469 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.4□□□□□ -2.03
USP54Q70EL1 AC078918.1-201ENST00000498515 228 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 PTP4A1P6-201ENST00000531034 478 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 AC010546.1-201ENST00000569391 485 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.4□□□□□ -2.03
USP54Q70EL1 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
USP54Q70EL1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
USP54Q70EL1 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USP54Q70EL1 RNU6-356P-201ENST00000384140 107 ntBASIC2.39□□□□□ -2.03
USP54Q70EL1 AC092638.1-201ENST00000411966 1275 ntBASIC2.39□□□□□ -2.03
USP54Q70EL1 NDUFA5P4-201ENST00000436704 385 ntBASIC2.39□□□□□ -2.03
USP54Q70EL1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.39□□□□□ -2.03
USP54Q70EL1 RNU7-27P-201ENST00000459281 62 ntBASIC2.39□□□□□ -2.03
USP54Q70EL1 AC092754.2-201ENST00000463506 460 ntBASIC2.39□□□□□ -2.03
USP54Q70EL1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.39□□□□□ -2.03
USP54Q70EL1 AP003072.4-201ENST00000624580 310 ntBASIC2.39□□□□□ -2.03
USP54Q70EL1 AL121594.5-201ENST00000631724 573 ntBASIC2.39□□□□□ -2.03
USP54Q70EL1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
USP54Q70EL1 AL109809.4-201ENST00000603520 2185 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 RNA5SP138-201ENST00000365098 114 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 RNU6-317P-201ENST00000384031 107 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 RNU6-167P-201ENST00000384292 106 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 MIR7-2-201ENST00000384970 110 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 MIR1323-201ENST00000408090 73 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 RNA5SP498-201ENST00000411342 120 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 RPL19P1-201ENST00000411635 428 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.38□□□□□ -2.03
USP54Q70EL1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USP54Q70EL1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.38□□□□□ -2.03
USP54Q70EL1 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.38□□□□□ -2.03
USP54Q70EL1 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.38□□□□□ -2.03
USP54Q70EL1 RNU7-95P-201ENST00000459222 64 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.38□□□□□ -2.03
USP54Q70EL1 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
USP54Q70EL1 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.38□□□□□ -2.03
USP54Q70EL1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.38□□□□□ -2.03
USP54Q70EL1 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.38□□□□□ -2.03
USP54Q70EL1 AC090425.2-201ENST00000608818 501 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 AC104307.1-201ENST00000616142 196 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 AL353748.2-201ENST00000622148 471 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 AC090897.3-201ENST00000636973 1157 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
USP54Q70EL1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.38□□□□□ -2.03
USP54Q70EL1 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
USP54Q70EL1 RNU2-17P-201ENST00000410290 190 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 PRELID3BP11-201ENST00000414230 479 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 TOMM22P1-201ENST00000418578 312 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.37□□□□□ -2.03
USP54Q70EL1 ELOCP11-201ENST00000436690 332 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 ELOCP16-201ENST00000444494 332 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.37□□□□□ -2.03
USP54Q70EL1 TRMT112P2-201ENST00000512910 132 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 SNORA25.15-201ENST00000516487 89 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.37□□□□□ -2.03
USP54Q70EL1 OR4P1P-201ENST00000530808 1136 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.37□□□□□ -2.03
USP54Q70EL1 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
USP54Q70EL1 AC110774.1-201ENST00000623567 2018 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 MTCO1P6-201ENST00000481192 1384 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AC096656.1-201ENST00000623826 1364 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.37□□□□□ -2.03
USP54Q70EL1 MTCYBP29-201ENST00000436327 1006 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.37□□□□□ -2.03
USP54Q70EL1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.37□□□□□ -2.03
USP54Q70EL1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
USP54Q70EL1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.37□□□□□ -2.03
USP54Q70EL1 MLLT10P2-201ENST00000506434 249 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.37□□□□□ -2.03
USP54Q70EL1 AC010735.1-201ENST00000567305 1026 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.37□□□□□ -2.03
USP54Q70EL1 KATNBL1P1-201ENST00000605192 748 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AC012213.4-201ENST00000606457 354 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AL391834.1-201ENST00000609609 560 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AC005156.1-201ENST00000613371 573 ntBASIC2.37□□□□□ -2.03
USP54Q70EL1 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.37□□□□□ -2.03
USP54Q70EL1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.36□□□□□ -2.03
USP54Q70EL1 AL157700.1-201ENST00000561973 1432 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 AC026241.1-201ENST00000517873 2142 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
USP54Q70EL1 RNA5SP295-201ENST00000362655 121 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 Y_RNA.62-201ENST00000362840 99 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.36□□□□□ -2.03
USP54Q70EL1 MTND4P11-201ENST00000417020 1058 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 MTCO1P43-201ENST00000431831 488 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 Z73417.1-201ENST00000447373 778 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 HMGN2P21-201ENST00000447764 270 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.36□□□□□ -2.03
USP54Q70EL1 TPMTP4-201ENST00000450749 678 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 RPS29P12-201ENST00000460178 152 ntBASIC2.36□□□□□ -2.03
USP54Q70EL1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms