Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 PIGPP2-201ENST00000411569 458 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 RPL31P12-201ENST00000422587 358 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC018630.2-202ENST00000422992 927 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC009237.8-201ENST00000445492 379 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 RPL21P8-201ENST00000465083 535 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC068587.2-201ENST00000478386 781 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC110768.1-201ENST00000509222 400 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 RNA5SP291-201ENST00000517222 105 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC026333.2-201ENST00000542164 106 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 HMGB1P14-201ENST00000557424 591 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 MIR5047-201ENST00000579212 100 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC006130.2-201ENST00000586202 326 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC022146.1-201ENST00000595307 847 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC013244.3-201ENST00000605614 388 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC006133.1-201ENST00000617106 264 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC039056.2-201ENST00000622261 511 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC092628.2-201ENST00000622492 339 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AL356596.1-201ENST00000624230 379 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC019226.1-201ENST00000625666 515 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC058791.1-201ENST00000608412 3198 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.19□□□□□ -1.9
NHLRC1Q6VVB1 AC233263.6-201ENST00000631132 1963 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 MIR200C-201ENST00000384980 68 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 MIR670-201ENST00000390142 98 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 ATP5F1P3-201ENST00000397213 657 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 RPL21P17-201ENST00000397467 475 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 PTMAP2-201ENST00000397627 327 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AL354719.1-201ENST00000406535 843 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 CYCSP19-201ENST00000411715 316 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 HMGB1P11-201ENST00000413899 637 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 DBIP2-201ENST00000419076 262 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 BX119904.4-201ENST00000424402 301 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 CYCSP4-201ENST00000429682 331 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC092473.1-201ENST00000441098 221 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AL831737.1-201ENST00000441288 271 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 FCF1P3-201ENST00000496394 590 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC109464.2-201ENST00000510242 943 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 RNU1-95P-201ENST00000516357 160 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 RNU1-128P-201ENST00000516704 160 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 RNU6-678P-201ENST00000516832 109 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 OR5G4P-201ENST00000525251 760 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AP000926.4-201ENST00000527351 454 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC124947.2-202ENST00000552735 133 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 GTF2IP22-201ENST00000554443 182 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AL355836.1-201ENST00000555951 870 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 MIR3609-201ENST00000582661 80 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 BNIP3P23-201ENST00000599655 511 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AL031985.2-201ENST00000600955 480 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 BNIP3P38-201ENST00000601117 544 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC112187.2-201ENST00000604345 283 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC004908.2-201ENST00000609090 574 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AL603758.1-201ENST00000618654 241 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AP003122.6-201ENST00000623831 495 ntBASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NHLRC1Q6VVB1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms