Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 RNU1-70P-201ENST00000362618 164 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 SNORA73.2-201ENST00000364946 201 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 MIR493-201ENST00000385254 89 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AL356421.1-201ENST00000403255 413 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 BX890604.2-201ENST00000427883 474 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 RPL26P6-201ENST00000440913 438 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 PAXBP1P1-201ENST00000449315 447 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 PDSS1P2-201ENST00000449397 678 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC021382.1-201ENST00000483523 359 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 VN1R104P-201ENST00000505115 1009 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 RNA5SP216-201ENST00000516111 123 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 FAM60DP-201ENST00000524174 632 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC125611.2-201ENST00000551907 647 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 MIR3158-1-201ENST00000583596 81 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 MIR4276-201ENST00000584832 70 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC245389.1-201ENST00000605141 529 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC013244.3-201ENST00000605614 388 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC091903.1-201ENST00000624322 454 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC073476.4-201ENST00000628409 72 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
CASC4Q6P4E1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CASC4Q6P4E1 AC092447.10-201ENST00000620607 1652 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 MTCO1P9-201ENST00000505577 1534 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 MIR449B-201ENST00000384995 97 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 RPL32P35-201ENST00000415214 394 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 HSFY4P-201ENST00000415994 1181 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 XKRYP1-201ENST00000423438 492 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 RPL7P46-201ENST00000425129 740 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 XKRYP2-201ENST00000432915 492 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC090774.1-201ENST00000435925 246 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC125238.1-201ENST00000448842 249 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 RPL23AP35-201ENST00000451906 501 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC006499.5-201ENST00000505037 514 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AP005205.1-201ENST00000563503 508 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC034268.2-201ENST00000571784 482 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AL133393.1-201ENST00000603277 287 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AL158211.4-201ENST00000606988 584 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 U3.45-201ENST00000607547 219 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AL607023.1-201ENST00000620045 248 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 AC103706.2-201ENST00000638080 240 ntBASIC3.31□□□□□ -1.88
CASC4Q6P4E1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.31□□□□□ -1.88
CASC4Q6P4E1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 RNU6-433P-201ENST00000363216 104 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 RNA5SP50-201ENST00000363731 107 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AL354719.1-201ENST00000406535 843 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 MIR320C1-201ENST00000408566 88 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.3□□□□□ -1.88
CASC4Q6P4E1 HMGB3P23-201ENST00000414981 585 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 HIGD1AP15-201ENST00000416198 280 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 FTH1P1-201ENST00000437933 532 ntBASIC3.3□□□□□ -1.88
CASC4Q6P4E1 AC091862.1-201ENST00000438016 1100 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms