Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AP001350.1-201ENST00000601906 1524 ntBASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRPF40BQ6NWY9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 HSPE1P11-201ENST00000339579 310 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-552P-201ENST00000362869 119 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-43P-201ENST00000384302 107 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 RNA5SP171-201ENST00000391071 115 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AL080315.1-201ENST00000406055 466 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 GTF2IP13-201ENST00000438487 386 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AL031584.1-201ENST00000447169 754 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.635-201ENST00000459041 101 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AL591473.1-201ENST00000464297 313 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 RN7SL809P-201ENST00000482040 297 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 MTCO1P29-201ENST00000496868 288 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC116562.3-201ENST00000506136 177 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC091885.1-201ENST00000506658 268 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 KLHL2P1-201ENST00000508691 521 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 RN7SKP219-201ENST00000516825 296 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 RNA5SP503-201ENST00000517047 117 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC068587.5-201ENST00000528506 175 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 OR8R1P-201ENST00000543943 764 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC124068.1-201ENST00000563131 678 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AL590099.1-201ENST00000615276 138 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 uc_338.15-201ENST00000615470 191 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 AC004972.1-201ENST00000623934 2209 ntBASIC5.66□□□□□ -1.5
PRPF40BQ6NWY9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC007529.1-201ENST00000418574 2178 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 Z95327.2-201ENST00000414579 1873 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 MIR369-201ENST00000362155 70 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.202-201ENST00000364083 110 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.216-201ENST00000364205 93 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 RNVU1-3-201ENST00000364313 161 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 UBBP2-201ENST00000376781 231 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 SDHCP2-201ENST00000398565 501 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AL161631.1-201ENST00000417933 486 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AL451062.2-201ENST00000427515 271 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AL132765.1-201ENST00000434165 553 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 MTATP6P16-201ENST00000434543 526 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 HSFY6P-201ENST00000445573 403 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 Y_RNA.631-201ENST00000459607 101 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 RPL7L1P8-201ENST00000469911 741 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC126389.1-201ENST00000477436 290 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC083904.1-201ENST00000487828 231 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 RNU2-10P-201ENST00000516375 211 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 RNU6-798P-201ENST00000516912 103 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 HMGB1P41-201ENST00000520234 440 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC103843.2-201ENST00000530523 682 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AL022099.1-201ENST00000604551 712 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC080078.3-201ENST00000605407 463 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AC008121.3-201ENST00000618726 433 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AL133216.2-202ENST00000634512 349 ntBASIC5.65□□□□□ -1.5
PRPF40BQ6NWY9 AP000542.2-201ENST00000623199 6179 ntBASIC5.65□□□□□ -1.51
PRPF40BQ6NWY9 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PRPF40BQ6NWY9 MTND4P14-201ENST00000435799 1354 ntBASIC5.65□□□□□ -1.51
PRPF40BQ6NWY9 AC244517.1-201ENST00000606030 2086 ntBASIC5.65□□□□□ -1.51
PRPF40BQ6NWY9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
PRPF40BQ6NWY9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 AC126323.6-202ENST00000568092 3511 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 SPRR2C-201ENST00000290702 219 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 RNU6-38P-201ENST00000384085 107 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 MIR1271-201ENST00000408537 86 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 RNU2-39P-201ENST00000410604 198 ntBASIC5.64□□□□□ -1.51
PRPF40BQ6NWY9 ARL5AP1-201ENST00000418991 388 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms