Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RPL7P15-201ENST00000461190 712 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC010469.1-201ENST00000463864 576 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC087879.1-201ENST00000474343 374 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 RPL39P36-201ENST00000490784 156 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 RPL30P11-201ENST00000495304 339 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 RPL29P14-201ENST00000495837 428 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
KRT40Q6A162 MTND3P22-201ENST00000510932 243 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 FTH1P21-201ENST00000512179 511 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT40Q6A162 RNU6-1220P-201ENST00000517126 108 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC123904.3-201ENST00000547218 814 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 MIR3167-201ENST00000579623 85 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC007621.1-201ENST00000604544 437 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AL451044.1-201ENST00000604867 238 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AL009028.1-201ENST00000604895 802 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AL161734.1-201ENST00000609720 557 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 RMST_3.1-201ENST00000611651 109 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AL133173.2-201ENST00000614270 90 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC091953.2-201ENST00000623979 160 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 FER-210ENST00000628534 558 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT40Q6A162 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT40Q6A162 AC010149.2-201ENST00000637608 315 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 AC027290.2-201ENST00000623210 18662 ntBASIC4.7□□□□□ -1.66
KRT40Q6A162 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRT40Q6A162 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.7□□□□□ -1.66
KRT40Q6A162 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
KRT40Q6A162 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 MIR448-201ENST00000362131 111 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 RNU6-451P-201ENST00000362921 107 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 SNORD35B-201ENST00000363660 87 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 RNU6-1226P-201ENST00000384317 107 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 SNORA3C-201ENST00000408792 125 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT40Q6A162 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT40Q6A162 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.69□□□□□ -1.66
KRT40Q6A162 AC019097.1-201ENST00000424783 735 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 GTF2IP20-201ENST00000431663 360 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.69□□□□□ -1.66
KRT40Q6A162 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT40Q6A162 RPS15AP9-201ENST00000439856 381 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AL353748.1-201ENST00000440753 474 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT40Q6A162 AL133547.1-201ENST00000448546 220 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AC104563.1-201ENST00000476147 376 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AC034222.1-201ENST00000494052 532 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 RPL31P61-201ENST00000496160 376 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.69□□□□□ -1.66
KRT40Q6A162 Vault.3-201ENST00000516676 95 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 MYL12AP1-201ENST00000518490 515 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 TRMT10BP1-201ENST00000519377 943 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.69□□□□□ -1.66
KRT40Q6A162 AC107934.1-201ENST00000522215 217 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 CENPUP1-201ENST00000526649 1202 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT40Q6A162 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT40Q6A162 MIR3200-201ENST00000580767 85 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT40Q6A162 AC005261.5-201ENST00000596280 355 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT40Q6A162 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT40Q6A162 OR10AB1P-201ENST00000609613 938 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT40Q6A162 AL355472.4-201ENST00000610233 626 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT40Q6A162 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 AC010133.1-201ENST00000615809 842 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
KRT40Q6A162 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
KRT40Q6A162 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT40Q6A162 AC092125.1-201ENST00000562568 1995 ntBASIC4.69□□□□□ -1.66
KRT40Q6A162 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT40Q6A162 AC107027.3-201ENST00000565095 3473 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
KRT40Q6A162 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRT40Q6A162 Y_RNA.263-201ENST00000364659 114 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 SNORA73.2-201ENST00000364946 201 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 AC019155.1-201ENST00000382242 574 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 Y_RNA.535-201ENST00000384612 99 ntBASIC4.68□□□□□ -1.66
KRT40Q6A162 MIR449B-201ENST00000384995 97 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms