Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 RPL21P13-201ENST00000488305 481 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC005178.1-201ENST00000508392 440 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 APOOP4-201ENST00000513530 597 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 RNU6-1095P-201ENST00000516148 108 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 ROCK1P1-201ENST00000573767 549 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AL365503.1-201ENST00000605247 905 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC026422.1-201ENST00000623961 452 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC006386.2-201ENST00000624491 75 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC012005.1-201ENST00000624575 75 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC091965.5-201ENST00000624785 342 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AC066616.2-201ENST00000559334 1481 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 AL513185.3-201ENST00000433335 1300 ntBASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.39□□□□□ -1.87
LYSMD4Q5XG99 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 Y_RNA.18-201ENST00000362461 102 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 RNA5SP88-201ENST00000365560 109 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 RNU6-1074P-201ENST00000383995 104 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 SKINT1L-201ENST00000401057 817 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 MIR320C1-201ENST00000408566 88 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 RNA5SP306-201ENST00000411087 107 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC099677.1-201ENST00000420575 175 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 LARP1BP3-201ENST00000437229 869 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 PAXBP1P1-201ENST00000449315 447 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 HMGN2P16-201ENST00000456802 261 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 S100A11P2-201ENST00000467589 312 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC104563.1-201ENST00000476147 376 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC106872.2-201ENST00000494303 480 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC068305.1-201ENST00000497406 726 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC117532.1-201ENST00000514638 323 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 SYF2P1-201ENST00000550658 413 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 SNORD84-203ENST00000584275 78 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC011468.4-201ENST00000603942 409 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC090186.1-201ENST00000605991 572 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC012531.5-201ENST00000611375 151 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AL356266.1-201ENST00000623311 483 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 PCMTD1P7-201ENST00000634506 357 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LYSMD4Q5XG99 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 ZNF807-201ENST00000328088 1707 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 RNU6-50P-201ENST00000362356 103 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 Y_RNA.234-201ENST00000364409 97 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 Y_RNA.302-201ENST00000364997 102 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 Y_RNA.510-201ENST00000384511 114 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AL357075.1-201ENST00000404107 726 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 RNU4-47P-201ENST00000410876 114 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AC118469.1-201ENST00000442943 488 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 MTCO1P27-201ENST00000448269 226 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 ZNF114P1-201ENST00000453500 292 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 snoU13.8-201ENST00000458890 104 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 HMGB1P36-201ENST00000487709 576 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AC020893.1-201ENST00000502452 580 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 TXNP6-201ENST00000510190 310 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AC018630.1-201ENST00000541376 925 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 CR383656.7-201ENST00000548164 174 ntBASIC3.37□□□□□ -1.87
LYSMD4Q5XG99 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms