Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RNA5SP132-201ENST00000364725 118 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 RNA5SP267-201ENST00000364893 126 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 SNORD82-201ENST00000365530 70 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-1226P-201ENST00000384317 107 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 MIR143-201ENST00000385300 106 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 SNORA40-201ENST00000388090 126 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 MIR190B-201ENST00000401119 79 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AL590704.1-201ENST00000402856 794 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 RNU2-15P-201ENST00000410692 191 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC116036.1-201ENST00000412199 367 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC015977.1-201ENST00000418887 292 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AL160275.3-201ENST00000423876 471 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 RN7SL72P-201ENST00000460697 269 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 RPL23AP65-201ENST00000475608 468 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 RN7SL629P-201ENST00000489622 285 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC009120.1-201ENST00000493458 473 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-615P-201ENST00000516065 106 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-1012P-201ENST00000516606 109 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC139365.2-201ENST00000517972 253 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC007458.1-201ENST00000542812 373 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC007225.2-201ENST00000562529 256 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC110801.1-201ENST00000623590 212 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 CU639417.4-201ENST00000623928 207 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AL691477.1-201ENST00000624398 162 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 THAP12P9-201ENST00000503971 2360 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC009779.8-201ENST00000641684 4384 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 AC009951.1-201ENST00000623674 2614 ntBASIC5.27□□□□□ -1.57
RNFT1Q5M7Z0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC125336.1-201ENST00000508893 2827 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC011504.1-201ENST00000623331 4103 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AL159987.1-201ENST00000347911 293 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 Y_RNA.71-201ENST00000362892 104 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 Y_RNA.218-201ENST00000364218 104 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 RNU6-701P-201ENST00000384059 107 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 MIR569-201ENST00000385228 96 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 MIR1178-201ENST00000408396 91 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 OR2AT2P-201ENST00000413438 905 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC069213.2-201ENST00000420238 366 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC022022.1-201ENST00000430304 178 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC092573.2-201ENST00000434546 243 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 GAPDHP27-201ENST00000447427 1020 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC007395.1-201ENST00000451333 677 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 FRG2FP-204ENST00000453982 852 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 RPL32P33-201ENST00000487023 394 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 RN7SKP288-201ENST00000516227 268 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 MIR2117-201ENST00000516780 80 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 CYCSP26-201ENST00000534107 320 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AC073349.3-201ENST00000617616 186 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 CR392039.4-201ENST00000624968 501 ntBASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNFT1Q5M7Z0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms