Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MIR383-201ENST00000362257 73 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 RNU6-1120P-201ENST00000362988 108 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MIR558-201ENST00000384920 94 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MIR93-201ENST00000385024 80 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MIR708-201ENST00000390708 88 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 SNORA48.7-201ENST00000391302 135 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL022722.2-201ENST00000402519 180 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MTATP6P18-201ENST00000417994 673 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 OR2AS1P-201ENST00000427827 319 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC079780.1-201ENST00000428259 207 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 UBE2V1P8-201ENST00000437166 265 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 RPL26P6-201ENST00000440913 438 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MTATP6P30-201ENST00000443540 664 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC012671.1-201ENST00000451912 203 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 RPS7P7-201ENST00000463499 571 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 SNORA31.22-201ENST00000517204 135 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 IGKV2D-23-201ENST00000518179 286 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL512310.1-201ENST00000548639 172 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL139395.1-201ENST00000603662 160 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL670379.6-201ENST00000603753 252 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL670379.11-201ENST00000604059 253 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC008162.1-201ENST00000604718 254 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL670379.1-201ENST00000604752 252 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL670379.5-201ENST00000605253 252 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL670379.12-201ENST00000605291 253 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL670379.8-201ENST00000605353 252 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AL670379.7-201ENST00000605823 252 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC006023.2-201ENST00000609916 167 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 uc_338.13-201ENST00000618243 179 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC110801.1-201ENST00000623590 212 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MFSD8-242ENST00000641690 4199 ntBASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC144BQ3MJ40 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 EXOC5P1-201ENST00000510543 1969 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 XIAPP3-201ENST00000312918 795 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-1085P-201ENST00000363576 107 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 Y_RNA.372-201ENST00000365599 102 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 RNU1-63P-201ENST00000383902 164 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 RNU1-44P-201ENST00000384453 163 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 RPL32P23-201ENST00000397237 405 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AL590002.1-201ENST00000406554 418 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC069157.1-201ENST00000421749 137 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 MTCO2P19-201ENST00000427513 598 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 FTH1P6-201ENST00000430768 320 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 RPS27AP17-201ENST00000463344 455 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC108860.1-201ENST00000484521 383 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-390P-201ENST00000516259 103 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 OR4R1P-201ENST00000529879 463 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC007363.1-201ENST00000604736 620 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AP002360.4-201ENST00000606980 481 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 SDR42E1P2-201ENST00000614861 481 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AC091905.2-201ENST00000623143 306 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AL157786.1-207ENST00000627771 695 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 SCN1A-220ENST00000641603 12506 ntBASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC144BQ3MJ40 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC144BQ3MJ40 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms